Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322F08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92811-2|CAI46583.1|  299|Caenorhabditis elegans Hypothetical pr...    93   8e-20
AL032648-8|CAI46618.1|  365|Caenorhabditis elegans Hypothetical ...    31   0.38 
U32275-1|AAA75370.1|  982|Caenorhabditis elegans serine-threonin...    31   0.50 
U11280-5|AAA19437.1|  982|Caenorhabditis elegans Protein kinase ...    31   0.50 
U11280-4|AAM97951.2|  353|Caenorhabditis elegans Protein kinase ...    31   0.50 
AC024876-3|AAU05556.1|  871|Caenorhabditis elegans Hypothetical ...    30   0.87 
Z68303-12|CAA92644.2|  969|Caenorhabditis elegans Hypothetical p...    28   3.5  
Z68302-9|CAA92636.2|  969|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z81536-11|CAB04363.2|  295|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z92811-2|CAI46583.1|  299|Caenorhabditis elegans Hypothetical
           protein T01G1.4 protein.
          Length = 299

 Score = 93.5 bits (222), Expect = 8e-20
 Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
 Frame = +1

Query: 46  RDEISRAASRIIDGVKENKISPENIDEELISQSLDLG----EPELLVRTSGEVRLSDFML 213
           RDEI+R+   I   VK+ K++ + I+E +I   LD G     P+L +RTSGE RLSDF++
Sbjct: 171 RDEIARSFETIRKHVKDGKVNVDEINESMIDACLDSGCGGTSPDLFIRTSGEHRLSDFLM 230

Query: 214 WQISNTVLYFTDVLWPEFTIWNLLAAIIHFQ 306
           WQ S T +YF DVLWPEF  +NL  AI+++Q
Sbjct: 231 WQASETHVYFDDVLWPEFGYFNLCKAILNYQ 261


>AL032648-8|CAI46618.1|  365|Caenorhabditis elegans Hypothetical
           protein Y54G9A.10 protein.
          Length = 365

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 493 RLLYSR*IVEAFRLIYFIVLIRNIN*YILLVLELFFALNISKIPSFRAPFHWCLPLL--- 323
           R+ Y   I++ F L+ F  L+  I+   L ++ LF+++  S I      FH  L +L   
Sbjct: 11  RICYPTYIIQNFELLKFPWLLLEISELFLFIITLFYSIKCSYIVLKVRTFHMNLSVLTVV 70

Query: 322 LEVHFSE 302
           L V FSE
Sbjct: 71  LIVQFSE 77


>U32275-1|AAA75370.1|  982|Caenorhabditis elegans serine-threonine
           kinase protein.
          Length = 982

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 211 LWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPP-IKAEDTNETAHEKKEFLKYLEQ 387
           +W +  T +   +   P F++ N ++A+ H  +N PP +   DT+E      EF++++++
Sbjct: 210 IWSLGITCIELAERRPPLFSM-NAMSALYHIAQNDPPTLSPIDTSEQPEWSLEFVQFIDK 268


>U11280-5|AAA19437.1|  982|Caenorhabditis elegans Protein kinase
           protein 18, isoforma protein.
          Length = 982

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 211 LWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPP-IKAEDTNETAHEKKEFLKYLEQ 387
           +W +  T +   +   P F++ N ++A+ H  +N PP +   DT+E      EF++++++
Sbjct: 210 IWSLGITCIELAERRPPLFSM-NAMSALYHIAQNDPPTLSPIDTSEQPEWSLEFVQFIDK 268


>U11280-4|AAM97951.2|  353|Caenorhabditis elegans Protein kinase
           protein 18, isoformb protein.
          Length = 353

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 211 LWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPP-IKAEDTNETAHEKKEFLKYLEQ 387
           +W +  T +   +   P F++ N ++A+ H  +N PP +   DT+E      EF++++++
Sbjct: 210 IWSLGITCIELAERRPPLFSM-NAMSALYHIAQNDPPTLSPIDTSEQPEWSLEFVQFIDK 268


>AC024876-3|AAU05556.1|  871|Caenorhabditis elegans Hypothetical
            protein Y94H6A.5b protein.
          Length = 871

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 23/90 (25%), Positives = 44/90 (48%)
 Frame = +1

Query: 13   EKNSKISWMKCRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGEPELLVRTSGEV 192
            + NSK +W      IS+    I+D V+   +  E + EEL+++ ++   PE L    GE 
Sbjct: 784  KSNSKTTWSIAVSRISKRRPSILDEVEPAVLVEEPV-EELVAELVE-EAPEGLAEEPGEA 841

Query: 193  RLSDFMLWQISNTVLYFTDVLWPEFTIWNL 282
              S+  +    + +++F  + W    I++L
Sbjct: 842  ENSETGV----DFLIFFFVIFWKFLLIFSL 867


>Z68303-12|CAA92644.2|  969|Caenorhabditis elegans Hypothetical
           protein ZK792.1a protein.
          Length = 969

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 259 PEFTIWNLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQELT 408
           P  T+ ++LAA+ H  R       + +  +  E KEF +YL   R Q +T
Sbjct: 575 PNATLISILAAVRHGDRFGLYTGGKCSELSEQEAKEFEEYLTVSRGQNIT 624


>Z68302-9|CAA92636.2|  969|Caenorhabditis elegans Hypothetical
           protein ZK792.1a protein.
          Length = 969

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 259 PEFTIWNLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQELT 408
           P  T+ ++LAA+ H  R       + +  +  E KEF +YL   R Q +T
Sbjct: 575 PNATLISILAAVRHGDRFGLYTGGKCSELSEQEAKEFEEYLTVSRGQNIT 624


>Z81536-11|CAB04363.2|  295|Caenorhabditis elegans Hypothetical
           protein F40D4.7 protein.
          Length = 295

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 203 ILCFGRFRIPFSISRMYCGQNSRFGIYWRPL 295
           ++C  +  +P++   + C  NS F  Y+RPL
Sbjct: 147 VICNYQLNVPYNCVNVGCAMNSCFRQYFRPL 177


>Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical
           protein F44F4.4 protein.
          Length = 890

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 120 YIFWRNFIFFDSVNYT*SCSAYFITT-FHPRD 28
           + FWR F+ FD+  +  + + +  TT FH +D
Sbjct: 611 FSFWRGFLRFDNQTHPHNVTKFMFTTGFHGQD 642


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.133    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,740,362
Number of Sequences: 27780
Number of extensions: 211143
Number of successful extensions: 601
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)