Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322F07f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 27 0.29
EF519362-1|ABP68471.1| 506|Anopheles gambiae LRIM1 protein. 25 1.5
EF519356-1|ABP68465.1| 500|Anopheles gambiae LRIM1 protein. 25 1.5
EF519354-1|ABP68463.1| 506|Anopheles gambiae LRIM1 protein. 25 1.5
EF519353-1|ABP68462.1| 470|Anopheles gambiae LRIM1 protein. 25 1.5
EF519352-1|ABP68461.1| 448|Anopheles gambiae LRIM1 protein. 25 1.5
EF519351-1|ABP68460.1| 486|Anopheles gambiae LRIM1 protein. 25 1.5
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.5 bits (58), Expect = 0.29
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 164 AELERQRQAMIQTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQREQLQNTDRR 340
A +ER+++ ++ QRE EQR + + R+ E+ E+ R+REQ + R
Sbjct: 464 AAIEREKERELREQREREQREKEQREKE---QREKEERERQQREKEQREREQREKERER 519
>EF519362-1|ABP68471.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.0 bits (52), Expect = 1.5
Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = +2
Query: 146 PYGGHIAELERQRQAMI-----QTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQ 310
P+ + L+R+ A++ +T+R +R + R I L++ + I +
Sbjct: 324 PFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQA 383
Query: 311 REQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTP 451
+ L+ + LDE +N + L+G GL +Q+P
Sbjct: 384 KITLEQKKKALDEQVSNGRRAHAELDGTLKQAVGLIELQHATEEQSP 430
>EF519356-1|ABP68465.1| 500|Anopheles gambiae LRIM1 protein.
Length = 500
Score = 25.0 bits (52), Expect = 1.5
Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = +2
Query: 146 PYGGHIAELERQRQAMI-----QTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQ 310
P+ + L+R+ A++ +T+R +R + R I L++ + I +
Sbjct: 324 PFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQA 383
Query: 311 REQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTP 451
+ L+ + LDE +N + L+G GL +Q+P
Sbjct: 384 KITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGLIELQHATEEQSP 430
>EF519354-1|ABP68463.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 25.0 bits (52), Expect = 1.5
Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = +2
Query: 146 PYGGHIAELERQRQAMI-----QTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQ 310
P+ + L+R+ A++ +T+R +R + R I L++ + I +
Sbjct: 324 PFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQA 383
Query: 311 REQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTP 451
+ L+ + LDE +N + L+G GL +Q+P
Sbjct: 384 KITLEQKKKALDEQVSNGRRAHAELDGTLKQAVGLIELQHATEEQSP 430
>EF519353-1|ABP68462.1| 470|Anopheles gambiae LRIM1 protein.
Length = 470
Score = 25.0 bits (52), Expect = 1.5
Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = +2
Query: 146 PYGGHIAELERQRQAMI-----QTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQ 310
P+ + L+R+ A++ +T+R +R + R I L++ + I +
Sbjct: 324 PFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQA 383
Query: 311 REQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTP 451
+ L+ + LDE +N + L+G GL +Q+P
Sbjct: 384 KITLEQKKKALDEQVSNGRRAHAELDGTLKQAVGLIELQHATEEQSP 430
>EF519352-1|ABP68461.1| 448|Anopheles gambiae LRIM1 protein.
Length = 448
Score = 25.0 bits (52), Expect = 1.5
Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = +2
Query: 146 PYGGHIAELERQRQAMI-----QTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQ 310
P+ + L+R+ A++ +T+R +R + R I L++ + I +
Sbjct: 324 PFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQA 383
Query: 311 REQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTP 451
+ L+ + LDE +N + L+G GL +Q+P
Sbjct: 384 KITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGLIELQHATEEQSP 430
>EF519351-1|ABP68460.1| 486|Anopheles gambiae LRIM1 protein.
Length = 486
Score = 25.0 bits (52), Expect = 1.5
Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = +2
Query: 146 PYGGHIAELERQRQAMI-----QTQREIEQRTIDSSTRSIGLLRDSEQIGIATAEELSRQ 310
P+ + L+R+ A++ +T+R +R + R I L++ + I +
Sbjct: 324 PFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLRKQA 383
Query: 311 REQLQNTDRRLDEINTNLNYSQKHLNGIKSVFYGLKNYISGKSDQTP 451
+ L+ + LDE +N + L+G GL +Q+P
Sbjct: 384 KITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGLIELQHATEEQSP 430
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,992
Number of Sequences: 2352
Number of extensions: 10309
Number of successful extensions: 76
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -