Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322E12f
         (496 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY240021-1|AAP57522.1|  595|Drosophila melanogaster SLC26 membra...    32   0.37 
AY051897-1|AAK93321.1|  595|Drosophila melanogaster LD38576p pro...    32   0.37 
AE013599-2553|AAF57797.1|  595|Drosophila melanogaster CG5002-PA...    32   0.37 

>AY240021-1|AAP57522.1|  595|Drosophila melanogaster SLC26 membrane
           transporter protein protein.
          Length = 595

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -1

Query: 334 ILLP*LFYLTQRFYFFV*CTFLAQYLSNFLGLISLH*NQALEIFQFWKS 188
           ++L  L +LTQ FYF   CT  A  ++  + L+ LH     +I   WKS
Sbjct: 377 LVLMALAFLTQTFYFIPKCTLAAIIIAAMISLVELH-----KIKDMWKS 420


>AY051897-1|AAK93321.1|  595|Drosophila melanogaster LD38576p
           protein.
          Length = 595

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -1

Query: 334 ILLP*LFYLTQRFYFFV*CTFLAQYLSNFLGLISLH*NQALEIFQFWKS 188
           ++L  L +LTQ FYF   CT  A  ++  + L+ LH     +I   WKS
Sbjct: 377 LVLMALAFLTQTFYFIPKCTLAAIIIAAMISLVELH-----KIKDMWKS 420


>AE013599-2553|AAF57797.1|  595|Drosophila melanogaster CG5002-PA
           protein.
          Length = 595

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -1

Query: 334 ILLP*LFYLTQRFYFFV*CTFLAQYLSNFLGLISLH*NQALEIFQFWKS 188
           ++L  L +LTQ FYF   CT  A  ++  + L+ LH     +I   WKS
Sbjct: 377 LVLMALAFLTQTFYFIPKCTLAAIIIAAMISLVELH-----KIKDMWKS 420


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,266,429
Number of Sequences: 53049
Number of extensions: 384556
Number of successful extensions: 802
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)