Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322E11f
(389 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X65923-1|CAA46716.1| 133|Homo sapiens fau protein. 86 3e-17
X65921-1|CAA46714.1| 133|Homo sapiens fau 1 protein. 86 3e-17
CR541974-1|CAG46772.1| 133|Homo sapiens FAU protein. 86 3e-17
BC033877-1|AAH33877.1| 133|Homo sapiens Finkel-Biskis-Reilly mu... 86 3e-17
AY398663-1|AAQ87877.1| 133|Homo sapiens Finkel-Biskis-Reilly mu... 86 3e-17
AK026639-1|BAB15515.1| 133|Homo sapiens protein ( Homo sapiens ... 86 3e-17
U87223-1|AAB48481.1| 1384|Homo sapiens contactin associated prot... 30 2.3
AK027396-1|BAB55082.1| 171|Homo sapiens protein ( Homo sapiens ... 29 7.1
>X65923-1|CAA46716.1| 133|Homo sapiens fau protein.
Length = 133
Score = 86.2 bits (204), Expect = 3e-17
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = -1
Query: 290 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 111
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 110 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKK 3
+LGGKVHGSLARAGKV+GQTPKV KQ+KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>X65921-1|CAA46714.1| 133|Homo sapiens fau 1 protein.
Length = 133
Score = 86.2 bits (204), Expect = 3e-17
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = -1
Query: 290 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 111
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 110 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKK 3
+LGGKVHGSLARAGKV+GQTPKV KQ+KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>CR541974-1|CAG46772.1| 133|Homo sapiens FAU protein.
Length = 133
Score = 86.2 bits (204), Expect = 3e-17
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = -1
Query: 290 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 111
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 110 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKK 3
+LGGKVHGSLARAGKV+GQTPKV KQ+KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>BC033877-1|AAH33877.1| 133|Homo sapiens Finkel-Biskis-Reilly
murine sarcoma virus (FBR-MuSV) ubiquitously expressed
protein.
Length = 133
Score = 86.2 bits (204), Expect = 3e-17
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = -1
Query: 290 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 111
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 110 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKK 3
+LGGKVHGSLARAGKV+GQTPKV KQ+KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>AY398663-1|AAQ87877.1| 133|Homo sapiens Finkel-Biskis-Reilly
murine sarcoma virus (FBR-MuSV) ubiquitously expressed
(fo protein.
Length = 133
Score = 86.2 bits (204), Expect = 3e-17
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = -1
Query: 290 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 111
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 110 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKK 3
+LGGKVHGSLARAGKV+GQTPKV KQ+KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>AK026639-1|BAB15515.1| 133|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22986 fis, clone KAT11742. ).
Length = 133
Score = 86.2 bits (204), Expect = 3e-17
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = -1
Query: 290 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 111
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 110 XXXLTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKK 3
+LGGKVHGSLARAGKV+GQTPKV KQ+KK
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKK 99
>U87223-1|AAB48481.1| 1384|Homo sapiens contactin associated protein
protein.
Length = 1384
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 253 RTCVDXPLICNCILXNPRXNSARGFXIFFNQI 348
R+CVD L CNC P+ + +G F + +
Sbjct: 721 RSCVDPALYCNCDADQPQWRTDKGLLTFVDHL 752
>AK027396-1|BAB55082.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ14490 fis, clone MAMMA1002886. ).
Length = 171
Score = 28.7 bits (61), Expect = 7.1
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 255 PGRQWPGVHWSDQGTHSY 202
PG W G HW QG +Y
Sbjct: 55 PGSAWSGDHWDSQGQEAY 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,899,503
Number of Sequences: 237096
Number of extensions: 883805
Number of successful extensions: 5470
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5464
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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