Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322E10f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK055443-1|BAB70924.1| 135|Homo sapiens protein ( Homo sapiens ... 31 2.4
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 31 3.2
BX537915-1|CAD97898.1| 315|Homo sapiens hypothetical protein pr... 30 4.3
BC119002-1|AAI19003.1| 844|Homo sapiens prickle homolog 2 (Dros... 30 4.3
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 30 4.3
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 30 4.3
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 30 4.3
AL592444-1|CAI39675.1| 298|Homo sapiens t-complex 10 (mouse) pr... 29 7.5
AL021331-1|CAI42705.1| 298|Homo sapiens t-complex 10 (mouse) pr... 29 7.5
>AK055443-1|BAB70924.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ30881 fis, clone FEBRA2004818, highly similar to
DRR1 PROTEIN. ).
Length = 135
Score = 31.1 bits (67), Expect = 2.4
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +1
Query: 55 RGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRTPGNRGLQCRPPSAREDQDHHP* 234
RG + +L R HR R L +++ L + P + L R + D HP
Sbjct: 57 RGLGVDSKPELQRVLEHRRRNQLIKKKKEELEAKRLQCPFEQELLRRQQRLNQVGDGHPA 116
Query: 235 GRDPEPGLPIR 267
G PGL R
Sbjct: 117 GTTHPPGLSSR 127
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 30.7 bits (66), Expect = 3.2
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 13 SNGQVDSRPRFDRLRGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRTPGNRGLQ 189
S+ + D R+ R R R R RSF + +RR+ P+ R T P R+ + Q
Sbjct: 106 SSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNRPTGRPRRSRSHSDNDSQ 164
>BX537915-1|CAD97898.1| 315|Homo sapiens hypothetical protein
protein.
Length = 315
Score = 30.3 bits (65), Expect = 4.3
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 34 RPRFDRLRGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRTPGNRGLQCRPP-SAR 210
+P +R R RRA+ R R HR RR+ + LH + R +R L+ RPP AR
Sbjct: 134 QPMSERTR-RRATSRDDNRRFRPHRSRRSRRSRSDNALHLASEREAISR-LKDRPPLRAR 191
Query: 211 EDQD 222
ED D
Sbjct: 192 EDYD 195
>BC119002-1|AAI19003.1| 844|Homo sapiens prickle homolog 2
(Drosophila) protein.
Length = 844
Score = 30.3 bits (65), Expect = 4.3
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 34 RPRFDRLRGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRTPGNRGLQCRPP-SAR 210
+P +R R RRA+ R R HR RR+ + LH + R +R L+ RPP AR
Sbjct: 663 QPMSERTR-RRATSRDDNRRFRPHRSRRSRRSRSDNALHLASEREAISR-LKDRPPLRAR 720
Query: 211 EDQD 222
ED D
Sbjct: 721 EDYD 724
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 13 SNGQVDSRPRFDRLRGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRT 168
S+ + D R+ R R R R RSF + +RR+ P+ R T P R+
Sbjct: 106 SSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNRPTGRPRRSRS 157
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 13 SNGQVDSRPRFDRLRGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRT 168
S+ + D R+ R R R R RSF + +RR+ P+ R T P R+
Sbjct: 106 SSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNRPTGRPRRSRS 157
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 13 SNGQVDSRPRFDRLRGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRT 168
S+ + D R+ R R R R RSF + +RR+ P+ R T P R+
Sbjct: 106 SSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNRPTGRPRRSRS 157
>AL592444-1|CAI39675.1| 298|Homo sapiens t-complex 10 (mouse)
protein.
Length = 298
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = +1
Query: 4 VNNSNGQVDSRPRFDRLRGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRTPGNRG 183
+++ + D+ P++ GR++ L + + H P T + +TP
Sbjct: 102 ISHLSADEDTTPKY---AGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQED 158
Query: 184 LQCRPPSAREDQDHHP*GRDPEPG 255
+ PP R+D+ P GR P PG
Sbjct: 159 REKSPPGRRQDRSPAPTGR-PTPG 181
>AL021331-1|CAI42705.1| 298|Homo sapiens t-complex 10 (mouse)
protein.
Length = 298
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = +1
Query: 4 VNNSNGQVDSRPRFDRLRGRRASGRVQLLRSFVHRHRRTLFPQQRGTLHPGACRTPGNRG 183
+++ + D+ P++ GR++ L + + H P T + +TP
Sbjct: 102 ISHLSADEDTTPKY---AGRKSQSATLLGQRWSSNHLAPPKPMSLKTERINSGKTPPQED 158
Query: 184 LQCRPPSAREDQDHHP*GRDPEPG 255
+ PP R+D+ P GR P PG
Sbjct: 159 REKSPPGRRQDRSPAPTGR-PTPG 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,030,410
Number of Sequences: 237096
Number of extensions: 1185285
Number of successful extensions: 4901
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4900
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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