Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322E08f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   0.82 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.5  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    21   7.7  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 215 RKLHLIQKKKRNNQLKEGTYPVIRLRFSN 129
           ++L   Q+K +NN +K  T PV+  RF +
Sbjct: 512 KELFSSQQKTKNNLMKLETTPVLPSRFQS 540


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 24  DLLPNEINGWFWTAELQK 77
           D+  N +N W WT  +++
Sbjct: 63  DVAYNNVNNWLWTPFIER 80


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 36  NEINGWFWTAELQKLA 83
           NE+N W+W  ++  L+
Sbjct: 361 NEMNKWWWNMKISNLS 376


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 502 CRKRNATCGYALRRIFR 452
           CR RN +C Y+L+R F+
Sbjct: 11  CR-RNFSCYYSLKRHFQ 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,292
Number of Sequences: 438
Number of extensions: 3742
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)