Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322E06f
(324 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical pr... 71 1e-13
U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula (ubiq... 60 5e-10
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 58 1e-09
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 58 1e-09
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 44 2e-05
AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical ... 44 3e-05
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 42 8e-05
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 34 0.027
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 30 0.44
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 30 0.44
Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 27 4.1
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 27 4.1
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 26 5.4
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 26 5.4
U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type chlo... 26 5.4
AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type chlo... 26 5.4
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z68493-11|CAA92798.2| 174|Caenorhabditis elegans Hypothetical p... 26 7.2
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 26 7.2
U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical pr... 26 7.2
AF047661-6|AAC04438.2| 577|Caenorhabditis elegans Hypothetical ... 26 7.2
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 25 9.5
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 25 9.5
>Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical
protein C08B6.9 protein.
Length = 343
Score = 71.3 bits (167), Expect = 1e-13
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +1
Query: 88 VELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVXLXDN 267
+E+S+AE YDRQIRLWG+++Q ++R +KVLIIG LGAE+AK + L GV + L D+
Sbjct: 1 MEVSKAEQAIYDRQIRLWGMEAQNKIRNSKVLIIGGKQLGAEVAKTLSLAGVDEMHLVDH 60
Query: 268 EKLKQIDLDSQFL 306
+ ++ FL
Sbjct: 61 RLVDTEEIGMNFL 73
>U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula
(ubiquitin activating)homolog protein 1 protein.
Length = 541
Score = 59.7 bits (138), Expect = 5e-10
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +1
Query: 115 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVXLXDNEKLKQIDLD 294
+YDRQ+RLWG + Q + + ++G L EI K+++L GV+S + D+ K++Q D+
Sbjct: 9 RYDRQVRLWGEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQSFYVVDDAKVEQADIG 68
Query: 295 SQFLXPPDKI 324
F D I
Sbjct: 69 QNFFLHADDI 78
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 58.4 bits (135), Expect = 1e-09
Identities = 34/77 (44%), Positives = 43/77 (55%)
Frame = +1
Query: 73 VGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSV 252
VG N EL + Y RQI G + LR A VLI GL +G EIAKN+IL GV+ V
Sbjct: 10 VGGNSDELLDKNL--YSRQIYTLGESAMVNLRTASVLISGLGSVGVEIAKNLILGGVRHV 67
Query: 253 XLXDNEKLKQIDLDSQF 303
+ D + K DL +Q+
Sbjct: 68 TIHDTKLAKWSDLSAQY 84
Score = 33.5 bits (73), Expect = 0.036
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Frame = +1
Query: 91 ELSEAEAE----QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKS--- 249
+LSE + + +YD Q ++G Q+ L + ++G +G E+ KN+ + GV
Sbjct: 402 KLSETDCQPRQSRYDGQAAVFGWPYQECLFRQRWFVVGAGAIGCELLKNLSMMGVACGEG 461
Query: 250 --VXLXDNEKLKQIDLDSQFL 306
+ + D ++++ +L+ QFL
Sbjct: 462 GLIKITDMDQIEISNLNRQFL 482
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 58.4 bits (135), Expect = 1e-09
Identities = 34/77 (44%), Positives = 43/77 (55%)
Frame = +1
Query: 73 VGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSV 252
VG N EL + Y RQI G + LR A VLI GL +G EIAKN+IL GV+ V
Sbjct: 95 VGGNSDELLDKNL--YSRQIYTLGESAMVNLRTASVLISGLGSVGVEIAKNLILGGVRHV 152
Query: 253 XLXDNEKLKQIDLDSQF 303
+ D + K DL +Q+
Sbjct: 153 TIHDTKLAKWSDLSAQY 169
Score = 33.5 bits (73), Expect = 0.036
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Frame = +1
Query: 91 ELSEAEAE----QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKS--- 249
+LSE + + +YD Q ++G Q+ L + ++G +G E+ KN+ + GV
Sbjct: 487 KLSETDCQPRQSRYDGQAAVFGWPYQECLFRQRWFVVGAGAIGCELLKNLSMMGVACGEG 546
Query: 250 --VXLXDNEKLKQIDLDSQFL 306
+ + D ++++ +L+ QFL
Sbjct: 547 GLIKITDMDQIEISNLNRQFL 567
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 44.4 bits (100), Expect = 2e-05
Identities = 19/55 (34%), Positives = 36/55 (65%)
Frame = +1
Query: 142 GLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVXLXDNEKLKQIDLDSQFL 306
G ++ + L+ K+L+IG GLG E+ KN+ L+G +++ + D + + +L+ QFL
Sbjct: 33 GPENFEALQNTKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQFL 87
>AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical
protein F42G8.6 protein.
Length = 402
Score = 43.6 bits (98), Expect = 3e-05
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 94 LSEAEAEQYDRQIRL--WGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVXLXDN 267
+S+ +A +Y RQ+ + +G+ QK L+ VLI+G GLG +A + G+ ++ + D
Sbjct: 10 ISKKDAGRYSRQLLVDDFGVSGQKNLKNLNVLIVGAGGLGCPVATYLGAAGIGTIGIVDY 69
Query: 268 EKLKQIDLDSQFLXPPDKI 324
+ + +L Q D++
Sbjct: 70 DHISLDNLHRQVAYKEDQV 88
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 42.3 bits (95), Expect = 8e-05
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +1
Query: 148 DSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVXLXDNEKLKQIDLDSQFL 306
+ +++ +K+L+IG G+G E+ KN+ +TG + V + D + + +L+ QFL
Sbjct: 6 EKHEKIVQSKILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNRQFL 58
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 33.9 bits (74), Expect = 0.027
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +1
Query: 133 RLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVXLXDNEKLKQIDLDSQFLXP 312
R+ ++ +R+R V ++G+ G+G+ +A+ + G+ + L D +K++ +++ F P
Sbjct: 72 RMGIVNEYERIREKTVAVVGVGGVGSVVAEMLTRCGIGKLILFDYDKVEIANMNRLFYQP 131
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 29.9 bits (64), Expect = 0.44
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 157 KRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVXLXDN 267
+R KVLI+G LG IA+ +I GV+ + DN
Sbjct: 320 ERYSQLKVLILGAGTLGCNIARCLIGWGVRHISFLDN 356
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 29.9 bits (64), Expect = 0.44
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 157 KRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVXLXDN 267
+R KVLI+G LG IA+ +I GV+ + DN
Sbjct: 320 ERYSQLKVLILGAGTLGCNIARCLIGWGVRHISFLDN 356
>Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical
protein AC3.8 protein.
Length = 531
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 83 LFPTIFCNAVIYNFNKFSTIFGYN 12
LF ++CN + YN+ + +FGY+
Sbjct: 9 LFFALYCNVLAYNYLVVAPVFGYS 32
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 70 MVGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGL 204
+ G NE E+ +A AE + LW + A +VLI G S L
Sbjct: 234 LAGGNEAEVEKAAAENGTIAVLLW-RPAMTDQSAVRVLISGTSSL 277
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 141 PQADLSVVLFGFCLRKFDFIISNHFLQC 58
P A+ V+ G C+ + + + + FLQC
Sbjct: 99 PSAEKDAVICGVCINQRNIVAAGDFLQC 126
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 70 MVGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGL 204
+ G NE E+ +A AE + LW + A +VLI G S L
Sbjct: 212 LAGGNEAEVEKAAAENGTIGVLLW-RPAMTDQSAVRVLISGTSSL 255
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 145 LDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVXL 258
+DS + ++ GLSG+G EI K + G ++V L
Sbjct: 3195 VDSDSPITGNWLITGGLSGIGLEIGKFIANNGAENVIL 3232
>U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform a protein.
Length = 1001
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 166 RAAKVLIIGLSGLGAEIAKNVILTGV 243
RA++ LI+ ++ G ++AKN LTG+
Sbjct: 665 RASRFLIVPVAKNGPQVAKNETLTGL 690
>AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type
chloride channel CLH-3b protein.
Length = 1001
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 166 RAAKVLIIGLSGLGAEIAKNVILTGV 243
RA++ LI+ ++ G ++AKN LTG+
Sbjct: 665 RASRFLIVPVAKNGPQVAKNETLTGL 690
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 61 LQKMVGNNEVELSEAEAEQYDRQIRLWGLD 150
LQ +VG + L A +YDR+ R+ LD
Sbjct: 752 LQSLVGKRQRVLFACTANKYDRKFRVTKLD 781
>Z68493-11|CAA92798.2| 174|Caenorhabditis elegans Hypothetical
protein C33A12.15 protein.
Length = 174
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 61 LQKMVGN-NEVELSEAEAEQYDRQIRLWGLDSQKRLR 168
+ KM+ N +VEL++ E E+Y + ++ + SQK+ R
Sbjct: 136 IPKMIFNIGDVELTKIETEKYGLEKFVYSIFSQKQCR 172
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 61 LQKMVGNNEVELSEAEAEQYDRQIRLWGLD 150
LQ +VG + L A +YDR+ R+ LD
Sbjct: 689 LQSLVGKRQRVLFACTANKYDRKFRVTKLD 718
>U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical
protein R08E3.3b protein.
Length = 516
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 7 LRLYPNIVLNLLKL*ITALQKMVGNNEVELSEAEAEQYDRQIRLWGLDSQK 159
+ LY +L +L+ AL++ VG + E+ E +QYD+Q L D Q+
Sbjct: 443 IHLYCMEILEMLRE-NGALKQAVGILQSEIYVEEQKQYDKQFELLHQDYQE 492
>AF047661-6|AAC04438.2| 577|Caenorhabditis elegans Hypothetical
protein M70.5 protein.
Length = 577
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 61 LQKMVGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSG 201
L + +G N + + E+ D ++R++ +D +R A LSG
Sbjct: 361 LARTIGGNLITMDRPPPEEQDPRLRVFRVDDDRRKTAVSDETFVLSG 407
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 157 KRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVXLXDNE 270
K L ++ ++G +GA IA I G+++V L N+
Sbjct: 348 KGLPVNEIAVVGAGFMGAGIANVTINKGIRTVLLDANQ 385
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 6 IEVVSKYRAKFIEIINNSIAKNGW 77
+ +V+K A ++I+ N +KNGW
Sbjct: 818 LAMVNKIGAGAVQIVQNKQSKNGW 841
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,216,717
Number of Sequences: 27780
Number of extensions: 123661
Number of successful extensions: 374
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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