Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322E06f
         (324 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   2.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   6.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          20   8.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   8.6  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -1

Query: 264 VXQXHTFYTGEDYVFCNFSAESG 196
           V Q HT     DY   +F  E G
Sbjct: 272 VLQDHTLEKSNDYYAFHFEGEKG 294


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 157 SASLSPTGGFVGRTV 113
           S + SPT   VG+TV
Sbjct: 929 SGTSSPTNSLVGKTV 943


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 3   NIEVVSKYRAKFIEIINNSIAKNGWK 80
           NI+ +  Y  K   +INN++A   +K
Sbjct: 457 NIDKLYTYFDKCDTLINNAVAVENFK 482


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 3   NIEVVSKYRAKFIEIINNSIAKNGWK 80
           NI+ +  Y  K   +INN++A   +K
Sbjct: 457 NIDKLYTYFDKCDTLINNAVAVENFK 482


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,596
Number of Sequences: 438
Number of extensions: 1356
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)