Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322E02f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0875 - 23920023-23920967,23921045-23921599,23921678-239220...    31   0.74 
03_02_0420 - 8298303-8299265,8299351-8299431,8299546-8299668,829...    29   3.0  
01_01_0014 + 84379-84600,84737-84830,84935-85086,85212-85299,853...    27   6.9  
11_05_0068 - 18782658-18782984,18784634-18784783,18784853-187857...    27   9.1  
06_03_0992 - 26680555-26680840,26680893-26681279,26681364-266824...    27   9.1  
03_02_0268 - 6994095-6994555,6996873-6996982,6997237-6998612           27   9.1  
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332...    27   9.1  

>12_02_0875 -
           23920023-23920967,23921045-23921599,23921678-23922083,
           23922175-23922452
          Length = 727

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +2

Query: 329 DLLYREIPRRVFHTDTRKHGGITDQVHAQRLSLPHRSAQDRLIA 460
           D   RE  RR  +   R HGG+      +RLS  H+S QD   A
Sbjct: 437 DAKLREDSRRRVNVGGRNHGGVGGGEATKRLSRGHKSMQDTTAA 480


>03_02_0420 -
           8298303-8299265,8299351-8299431,8299546-8299668,
           8299815-8299983,8300108-8300478
          Length = 568

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 20/79 (25%), Positives = 30/79 (37%)
 Frame = -1

Query: 521 KLSKVINFVMALVLTERSPTVQSVCLGQSGVARRVFAHELDQ*FRHVCGCRCGTLFEGFH 342
           KL  +I    A V   R P +    + +  VA+ +    LD+    VC C    L +   
Sbjct: 16  KLKSLIKLAAARVAVARRPRLGRRSIARGDVAQLLSIGHLDRALLRVCPCHAFALPDTRR 75

Query: 341 DTGGHLINFCAFFNKAQVI 285
           D+  +      F    QVI
Sbjct: 76  DSSANSSRRVLFLQAEQVI 94


>01_01_0014 +
           84379-84600,84737-84830,84935-85086,85212-85299,
           85348-86681,87291-87398,87500-87583
          Length = 693

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
 Frame = +3

Query: 198 GPECFQQKTENLKT---CFLN-LKQSFPTVESANNLSLVEKCAKVDEMTSCIVKS---LE 356
           G E  Q ++  L T   CF    K   P+V S N L   +  A +DE    +  +   L+
Sbjct: 431 GDEVHQCQSPELGTSDVCFGGPTKVVIPSVNSHNALEQCDSMASLDEPLLDVEMTCIPLD 490

Query: 357 ECSTPTPANMAESLIKFMRKDSPCHTALPKT 449
            C+T  P ++ E+    +     C T  P T
Sbjct: 491 PCATGVPYSVKETPAGVLCTSDHCSTGTPLT 521


>11_05_0068 -
           18782658-18782984,18784634-18784783,18784853-18785716,
           18785877-18786005,18786112-18786188,18786507-18786607,
           18786772-18786896
          Length = 590

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 225 ENLKTCFLNLK--QSFPTVESANNLSLVEKCAKVDEMTSCI 341
           E+LK CF+NL+   +F  + S   L L   C   +++ S +
Sbjct: 283 EHLKLCFMNLRPLPTFSGLRSLKTLDLALVCITTEDLESLL 323


>06_03_0992 -
           26680555-26680840,26680893-26681279,26681364-26682441,
           26682537-26683083
          Length = 765

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 364 EHSSRDFTIQEVISSTFAHFSTRLKLLADS 275
           EHSS  F +QE++ S +A  +T L  LA S
Sbjct: 509 EHSSFFFHVQEILYSRWAKSNTPLHCLAHS 538


>03_02_0268 - 6994095-6994555,6996873-6996982,6997237-6998612
          Length = 648

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 165 GDRIALFIAEG-GPECFQQKTENLKTCFLN 251
           G ++ L I  G GPE  QQ +E LK C +N
Sbjct: 413 GAKLLLVIQSGCGPELKQQASELLKLCTMN 442


>01_01_0447 -
           3327727-3328144,3328438-3328688,3328820-3328909,
           3329061-3329159,3329240-3329353,3329450-3329555,
           3329661-3329740,3329913-3330173,3330271-3330507,
           3330635-3330922
          Length = 647

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 108 INDAQNSTNQLIDFVCYKDGDRIALFIA 191
           I +A N ++QL+DF+   +G +I ++ A
Sbjct: 265 ICEASNKSSQLVDFLVQNNGKKIMVYFA 292


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,354,464
Number of Sequences: 37544
Number of extensions: 295745
Number of successful extensions: 901
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)