Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322D10f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_1015 - 22255135-22255693,22256437-22256836,22257938-222583... 42 3e-04
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 37 0.011
01_01_0877 - 6878905-6879600,6880696-6880968 34 0.080
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 33 0.11
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 33 0.14
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13... 33 0.18
11_01_0021 - 143576-143932,144434-144667,144988-145066,145138-14... 33 0.18
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 33 0.18
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 31 0.56
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 30 1.3
05_03_0668 + 16793061-16793181,16793289-16793384,16794406-167945... 29 1.7
07_03_0117 + 13589997-13590998 29 2.3
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 28 4.0
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 28 5.2
09_04_0437 - 17587944-17588909 27 6.9
>10_08_1015 -
22255135-22255693,22256437-22256836,22257938-22258371,
22259586-22259977
Length = 594
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEM 401
++++ +G LYKG P M R+ PANAACF+ +E+
Sbjct: 553 RKILAADGVKGLYKGFGPAMARSVPANAACFLAYEV 588
Score = 31.1 bits (67), Expect = 0.56
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -2
Query: 517 EMSQQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
++++ ++ + G L+KG+ P M R P NA F +E ++L
Sbjct: 155 DVAKHVVREAGMKGLFKGLVPTMGREVPGNAVMFGVYEGTKQYL 198
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 517 EMSQQLMEKEGPTA-LYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
++++Q++ EG L+KG+ P + R P NA F +E ++L
Sbjct: 452 DVAKQVLRSEGGVGGLFKGLGPTLAREVPGNALMFGVYEAIKQYL 496
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFLDWV 377
++++ KEG LYKG+ P ++++ PA A FV +E DW+
Sbjct: 296 KEIVAKEGFGGLYKGLFPSLVKSAPAGAVTFVAYEY---ISDWI 336
>01_01_0877 - 6878905-6879600,6880696-6880968
Length = 322
Score = 33.9 bits (74), Expect = 0.080
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 499 MEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
+ +EG L++G+ + RAF N A F +E+A++FL
Sbjct: 271 VREEGLPVLWRGLGTAVARAFVVNGAIFSAYELALRFL 308
Score = 30.7 bits (66), Expect = 0.74
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -2
Query: 517 EMSQQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMA 398
+M++ ++ KEG +Y+G+ +R PA+ F +E A
Sbjct: 166 DMARDILRKEGVRGIYRGLAVTALRDAPAHGVYFWTYEYA 205
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 502 LMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
+ME EG LYKG+ P I+ PA F+ +E K L
Sbjct: 373 IMENEGIGGLYKGLGPSCIKLMPAAGISFMCYEACKKIL 411
Score = 31.9 bits (69), Expect = 0.32
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -2
Query: 505 QLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVK 392
+++ +EGP+ LY+G+TP +I P A + ++ K
Sbjct: 274 KILREEGPSELYRGLTPSLIGVVPYAATNYYAYDTLKK 311
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -2
Query: 505 QLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVK 392
+++ +EGPT LY+G+TP +I P A + ++ K
Sbjct: 272 KIVREEGPTELYRGLTPSLIGVVPYAATNYFAYDTLKK 309
>12_01_0019 -
135627-135983,136564-136797,137118-137196,137268-137383,
137847-137991,138177-138594,138644-138649,139315-139945
Length = 661
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 502 LMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVK 392
++ EGP L+KG P P A F G+E+A K
Sbjct: 601 ILRNEGPLGLFKGAIPRFFWIAPLGAMNFAGYELAKK 637
>11_01_0021 -
143576-143932,144434-144667,144988-145066,145138-145253,
145717-145861,146048-146465,147206-147869
Length = 670
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 502 LMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVK 392
++ EGP L+KG P P A F G+E+A K
Sbjct: 610 ILRNEGPLGLFKGAIPRFFWIAPLGAMNFAGYELAKK 646
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 490 EGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
EG ALYKG+ P ++ P+ A FV +E K L
Sbjct: 313 EGVGALYKGLVPNSVKVVPSIAIAFVTYEFVQKVL 347
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 31.1 bits (67), Expect = 0.56
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAA--CFV 413
Q +++ EG LY+G++P ++ FP AA CF+
Sbjct: 69 QHILKNEGLPGLYRGLSPTIVALFPTWAAKYCFM 102
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFLDWVAPN 368
+Q+ +KEG Y+G ++R P F +EM + + + P+
Sbjct: 268 KQVYQKEGIPGFYRGCATNLLRTTPNAVITFTSYEMINRLMHQLLPH 314
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFE 404
+Q+ +KEG Y+G+ P ++ P+ F+ +E
Sbjct: 256 RQIFQKEGLRGFYRGIVPEYLKVVPSVGIAFMTYE 290
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 511 SQQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFLDWV 377
+ +++ +EG A +KG ++ P +A F +E KFL V
Sbjct: 57 ASRIVREEGFGAFWKGNLVTIVHRLPYSAISFYSYERYKKFLQRV 101
>05_03_0668 +
16793061-16793181,16793289-16793384,16794406-16794512,
16794726-16794774,16794858-16794967,16795329-16795423,
16795524-16795612,16795775-16795869,16795976-16796053,
16796425-16796481,16796776-16797027
Length = 382
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
QQ+ ++EG +Y+G++P ++ P A F +E L
Sbjct: 81 QQIAQREGFRGMYRGLSPTILALLPNWAVYFTVYEQLKSLL 121
>07_03_0117 + 13589997-13590998
Length = 333
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -2
Query: 517 EMSQQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFLDWVAPNL 365
+M +++ EG L++G +R F A F+ +E +FL AP+L
Sbjct: 82 QMLREIGRGEGVAGLFRGNGANALRVFHTKALHFMAYERYKRFLLGAAPSL 132
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 490 EGPTALYKGVTPVMIRAFPANAACFVGFEMAVK 392
EG AL+KG P ++RA N ++ +V+
Sbjct: 172 EGVLALWKGAGPTVVRAMSLNMGMLASYDQSVE 204
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -2
Query: 514 MSQQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAV 395
+S+ ++ EGP A Y+G+ P ++ P + G ++AV
Sbjct: 371 LSRDILMHEGPRAFYRGLVPSLLGIVP-----YAGIDLAV 405
>09_04_0437 - 17587944-17588909
Length = 321
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 505 QLMEKEGPTALYKGVTPVMIRAFPANAAC 419
Q++ EGPT L GV+ M+R + C
Sbjct: 74 QILRAEGPTGLLSGVSATMLRQTLYSTTC 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,044,905
Number of Sequences: 37544
Number of extensions: 181158
Number of successful extensions: 423
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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