Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322D10f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 56 2e-08
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 56 2e-08
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 56 2e-08
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 34 0.054
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 33 0.094
Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical pr... 31 0.66
X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein... 31 0.66
Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 30 1.2
U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 30 1.2
Z74028-1|CAA98424.1| 334|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical pr... 29 2.7
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF016675-4|AAB66137.1| 356|Caenorhabditis elegans Hypothetical ... 27 6.2
Z74039-5|CAA98504.1| 479|Caenorhabditis elegans Hypothetical pr... 24 9.1
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAV 395
++++ +EGP AL+KG PVM+RAFPANAACF G E+ +
Sbjct: 250 REVLREEGPRALFKGFWPVMLRAFPANAACFFGLELTL 287
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAV 395
++++ +EGP AL+KG PVM+RAFPANAACF G E+ +
Sbjct: 250 REVLREEGPRALFKGFWPVMLRAFPANAACFFGLELTL 287
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAV 395
++++ +EGP AL+KG PVM+RAFPANAACF G E+ +
Sbjct: 250 REVLREEGPRALFKGFWPVMLRAFPANAACFFGLELTL 287
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 34.3 bits (75), Expect = 0.054
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 517 EMSQQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFLD 383
EM+ ++ ++G A Y+G + +R F NA FV +E F D
Sbjct: 241 EMTLKIYREDGLRAFYRGGWAISLRGFVVNAVIFVVYENTYSFFD 285
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
+ +++ EG T LY+G+TP ++ PA + +V +E K L
Sbjct: 486 KHILQTEGFTGLYRGITPNFMKVIPAVSISYVVYEKVRKQL 526
>Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical
protein T09F3.2 protein.
Length = 384
Score = 30.7 bits (66), Expect = 0.66
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -2
Query: 505 QLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKF 389
Q+++ EG ALYKG+ P ++ P+ A F + + +F
Sbjct: 154 QVIKTEGIGALYKGLIPNLVGVAPSKAVYFYTYSTSKRF 192
>X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein
(c2) protein.
Length = 384
Score = 30.7 bits (66), Expect = 0.66
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -2
Query: 505 QLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKF 389
Q+++ EG ALYKG+ P ++ P+ A F + + +F
Sbjct: 154 QVIKTEGIGALYKGLIPNLVGVAPSKAVYFYTYSTSKRF 192
>Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical
protein T05F1.8 protein.
Length = 393
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 502 LMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL-DWVAP 371
+ ++EG T +KG+ P+ R P F FE V+ L +V P
Sbjct: 191 IYKQEGLTGFFKGLPPLWTRQIPYTMMKFTCFEKTVELLYQYVVP 235
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
+Q + G + G+ +IRAFP+NAA F E + L
Sbjct: 235 KQTYLERGYRGFFVGLNSALIRAFPSNAATFFTVEWTYRIL 275
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 508 QQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
+Q + G + G+ +IRAFP+NAA F E + L
Sbjct: 235 KQTYLERGYRGFFVGLNSALIRAFPSNAATFFTVEWTYRIL 275
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 517 EMSQQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFLD 383
+ + Q+ +KEG A YKG P + R F+ ++ ++FLD
Sbjct: 261 DCAMQIWKKEGFFAFYKGTVPRLSRVCLDVGITFMIYDSIIEFLD 305
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 505 QLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
++ ++EG L++G TP ++RA NAA + A + L
Sbjct: 156 RITKEEGVLTLWRGCTPTVLRAMVVNAAQLATYSQAKQAL 195
>U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical
protein C33F10.12 protein.
Length = 392
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 502 LMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL-DWVAP 371
+ ++EG T +KG+ P+ R P F FE V+ L +V P
Sbjct: 191 IYKQEGLTGFFKGLPPLWTRQIPYTMMKFTCFEKTVELLYQYVVP 235
>Z74028-1|CAA98424.1| 334|Caenorhabditis elegans Hypothetical
protein C14C10.1 protein.
Length = 334
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -2
Query: 517 EMSQQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
E + +KEG +KG+ P+ R P FV FE ++ +
Sbjct: 172 ECMPMIYKKEGMYGFFKGLPPLWTRQIPYTTVKFVCFERIMELM 215
>Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical
protein K08E4.5 protein.
Length = 357
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 227 LCLSAAMYYSILNNNVCDIIGLF---YYNLTPTTLHFSIIFSYYYFTLSKVW 373
LC A+ ++ + +I + YY + +HFS F YY+ +K W
Sbjct: 221 LCTVCALKLKMITKEISTVISINSVNYYLFWISIIHFSTSFWYYFSVETKQW 272
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = -2
Query: 517 EMSQQLMEKEGPTALYKGVTPVMIRAFPANAACFVGFEM 401
+ +++L+++EGP +L+KG + R+ P A + +E+
Sbjct: 605 DCARKLIKEEGPMSLWKGTAARVCRSSPQFAVTLLTYEV 643
>Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical
protein R11.1 protein.
Length = 289
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 496 EKEGPTALYKGVTPVMIRAFPANAACFVGFEMAVKFL 386
++EG ALYKG+ P ++R P A + ++ +L
Sbjct: 249 KEEGFGALYKGLLPKVMRLGPGGAVMLIVYDEVYSWL 285
>AF016675-4|AAB66137.1| 356|Caenorhabditis elegans Hypothetical
protein T27B7.5 protein.
Length = 356
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 272 VCDIIGLFYYNLTPTTLHFSIIFSYY 349
V +GLFY+ L P LHF I ++
Sbjct: 18 VYQCLGLFYFFLYPPVLHFLISLDFF 43
>Z74039-5|CAA98504.1| 479|Caenorhabditis elegans Hypothetical
protein K03B8.5 protein.
Length = 479
Score = 24.2 bits (50), Expect(2) = 9.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 332 IIFSYYYFTLSKVWCNPIQELHSHLKTNK 418
++FSY Y LS++ + I+E +SH + +
Sbjct: 96 LLFSYAYCGLSRLNEHDIEESYSHKRVKR 124
Score = 21.0 bits (42), Expect(2) = 9.1
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 251 YSILNNNVCDIIGLF--YYNLTPTTLHFSIIFSY 346
Y IL+ + ++ F Y PT LH + FSY
Sbjct: 28 YGILSISFAFLLIYFDVLYEKFPTDLHIPLDFSY 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,523,568
Number of Sequences: 27780
Number of extensions: 194547
Number of successful extensions: 527
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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