Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322D07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L18963-1|AAC14457.1|  152|Caenorhabditis elegans unc-60 protein.       41   6e-04
AF024494-2|AAL02463.1|  152|Caenorhabditis elegans Uncoordinated...    41   6e-04
AF024494-1|AAL02462.2|  212|Caenorhabditis elegans Uncoordinated...    41   6e-04
L18963-2|AAC14458.1|  165|Caenorhabditis elegans unc-60 protein.       38   0.004
AF024494-3|AAL02461.1|  165|Caenorhabditis elegans Uncoordinated...    38   0.004
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AC025723-3|AAK29935.1|  254|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U80450-11|AAM15595.1|  664|Caenorhabditis elegans Temporarily as...    27   6.2  
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass...    27   6.2  
U80450-8|AAK77616.1|  949|Caenorhabditis elegans Temporarily ass...    27   6.2  
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n...    27   6.2  

>L18963-1|AAC14457.1|  152|Caenorhabditis elegans unc-60 protein.
          Length = 152

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 21/54 (38%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
 Frame = -3

Query: 519 PDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLSEASQEAVEEKLRATDR 364
           PD A V+++MLY+SS  ALK SL G++    +QA+++S+  +++V+  L +  R
Sbjct: 99  PDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151


>AF024494-2|AAL02463.1|  152|Caenorhabditis elegans Uncoordinated
           protein 60, isoform c protein.
          Length = 152

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 21/54 (38%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
 Frame = -3

Query: 519 PDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLSEASQEAVEEKLRATDR 364
           PD A V+++MLY+SS  ALK SL G++    +QA+++S+  +++V+  L +  R
Sbjct: 99  PDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151


>AF024494-1|AAL02462.2|  212|Caenorhabditis elegans Uncoordinated
           protein 60, isoform b protein.
          Length = 212

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 21/54 (38%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
 Frame = -3

Query: 519 PDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLSEASQEAVEEKLRATDR 364
           PD A V+++MLY+SS  ALK SL G++    +QA+++S+  +++V+  L +  R
Sbjct: 159 PDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 211



 Score = 35.5 bits (78), Expect = 0.023
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -3

Query: 519 PDTAKVKKKMLYSSSFDALKKSL-VGVQKYIQATDLSEASQE 397
           PD A +KKKM+Y+SS  A+K SL  G     Q +D SE S +
Sbjct: 111 PDGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEMSHK 152


>L18963-2|AAC14458.1|  165|Caenorhabditis elegans unc-60 protein.
          Length = 165

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = -3

Query: 519 PDTAKVKKKMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 379
           PD A +KKKM+Y+SS  A+K SL  G     Q +D SE S + +  KL
Sbjct: 111 PDGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158


>AF024494-3|AAL02461.1|  165|Caenorhabditis elegans Uncoordinated
           protein 60, isoform a protein.
          Length = 165

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = -3

Query: 519 PDTAKVKKKMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 379
           PD A +KKKM+Y+SS  A+K SL  G     Q +D SE S + +  KL
Sbjct: 111 PDGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 406  RFREVGRLDVLLNSDKGLFQSVERARVQHLLLD 504
            RF E+G++D+  NS  G+ + ++   V  +LLD
Sbjct: 1828 RFLEIGKVDLSQNSSLGMAKLLDNVSVHGILLD 1860


>AC025723-3|AAK29935.1|  254|Caenorhabditis elegans Hypothetical
           protein Y54F10AM.6 protein.
          Length = 254

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 295 RQGRSVGERVRFRRELVCKCC 357
           R+GR  G+ ++FR E VC+CC
Sbjct: 196 RKGR--GKNIKFRTEKVCRCC 214


>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
           protein C01C7.1 protein.
          Length = 1043

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 415 LGSVSGGRRREAPRHRSPINSIYTRARDETEPA 317
           L ++S  R+   P  R P+ ++Y R +D   PA
Sbjct: 688 LTALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720


>U80450-11|AAM15595.1|  664|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 163, isoform d protein.
          Length = 664

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 366 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 458
           +RWRG    +PP   PR  S    + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465


>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 163, isoform a protein.
          Length = 1112

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 366 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 458
           +RWRG    +PP   PR  S    + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465


>U80450-8|AAK77616.1|  949|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 163, isoform c protein.
          Length = 949

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 366 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 458
           +RWRG    +PP   PR  S    + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465


>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
           non-receptor tyrosinekinase protein.
          Length = 1043

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 415 LGSVSGGRRREAPRHRSPINSIYTRARDETEPA 317
           L ++S  R+   P  R P+ ++Y R +D   PA
Sbjct: 688 LTALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,899,324
Number of Sequences: 27780
Number of extensions: 249949
Number of successful extensions: 679
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)