Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322D06f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical pr...    83   1e-16
Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical pr...    83   1e-16
Z66512-3|CAA91325.1|  179|Caenorhabditis elegans Hypothetical pr...    31   0.66 
U97405-9|AAB53012.2|  266|Caenorhabditis elegans C-term of hsp70...    30   0.87 
AF303269-1|AAG50227.1|  266|Caenorhabditis elegans Hsp70-interac...    30   0.87 
AL023828-7|CAA19452.1|  881|Caenorhabditis elegans Hypothetical ...    29   2.0  
U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain (pr...    28   4.7  
Z73976-5|CAA98282.1|  283|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF100304-4|AAC68910.1|  568|Caenorhabditis elegans Gex interacti...    27   8.1  
AF100304-3|AAP82634.1|  542|Caenorhabditis elegans Gex interacti...    27   8.1  
AF100304-2|AAU20837.1|  564|Caenorhabditis elegans Gex interacti...    27   8.1  
AF100304-1|AAC68913.1|  545|Caenorhabditis elegans Gex interacti...    27   8.1  

>Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 54/162 (33%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
 Frame = +3

Query: 45  LKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPTATF----GAKDFTAAGDXXXXXXX 212
           LK FV +C+  P +LH P+  FFKDYL+SLG +LP        G    +           
Sbjct: 7   LKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLPPKPADKPEGKCPMSEEPKKETPAAE 66

Query: 213 XXXXXXXXXXXXXXXXXLDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRA 392
                            +D EGVI P++   +  MGD                   A  A
Sbjct: 67  ATPEPEIPKPEEIPFPKIDNEGVIEPEEA-VALPMGDSAKEATEDEIEKASEERGKAQEA 125

Query: 393 FSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNA 518
           FS   +D A+  +TAAI+ NP SA+L AKR  V LKL +P A
Sbjct: 126 FSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLKLKRPVA 167


>Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 54/162 (33%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
 Frame = +3

Query: 45  LKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPTATF----GAKDFTAAGDXXXXXXX 212
           LK FV +C+  P +LH P+  FFKDYL+SLG +LP        G    +           
Sbjct: 7   LKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLPPKPADKPEGKCPMSEEPKKETPAAE 66

Query: 213 XXXXXXXXXXXXXXXXXLDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRA 392
                            +D EGVI P++   +  MGD                   A  A
Sbjct: 67  ATPEPEIPKPEEIPFPKIDNEGVIEPEEA-VALPMGDSAKEATEDEIEKASEERGKAQEA 125

Query: 393 FSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNA 518
           FS   +D A+  +TAAI+ NP SA+L AKR  V LKL +P A
Sbjct: 126 FSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLKLKRPVA 167


>Z66512-3|CAA91325.1|  179|Caenorhabditis elegans Hypothetical
           protein F52H3.5 protein.
          Length = 179

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 405 KYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKP 512
           + DEAI  +T A+++ P++   +  R Q Y   NKP
Sbjct: 58  RLDEAIEKFTKALEVCPKNPSAYNNRAQAYRLQNKP 93


>U97405-9|AAB53012.2|  266|Caenorhabditis elegans C-term of
           hsp70-interacting protein(chip family) protein 1
           protein.
          Length = 266

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 387 RAFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLN 506
           + +  ++YD+A++ Y+ AI++NP     +  R   Y +LN
Sbjct: 14  KCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLN 52


>AF303269-1|AAG50227.1|  266|Caenorhabditis elegans
           Hsp70-interacting protein protein.
          Length = 266

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 387 RAFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLN 506
           + +  ++YD+A++ Y+ AI++NP     +  R   Y +LN
Sbjct: 14  KCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLN 52


>AL023828-7|CAA19452.1|  881|Caenorhabditis elegans Hypothetical
           protein Y17G7B.5a protein.
          Length = 881

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 205 MKKKWNRHLTRNRSLNQM 258
           MKK ++RHLT NRS N++
Sbjct: 788 MKKTFSRHLTENRSANEL 805


>U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 7 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 405 KYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNA 518
           ++ +A+  Y AAI+L+P+S     +R   YL + +  A
Sbjct: 41  QFADALTQYHAAIELDPKSYQAIYRRATTYLAMGRGKA 78


>Z73976-5|CAA98282.1|  283|Caenorhabditis elegans Hypothetical
           protein T07C12.9 protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 71  NTAATITPSTIGVF*GLSDISWCIIADRYFWC 166
           NTA  + P    ++ G+ + +WC    R F C
Sbjct: 208 NTAGAVKPGGYLIYGGIFEETWCSFGGRKFTC 239


>AF100304-4|AAC68910.1|  568|Caenorhabditis elegans Gex interacting
           protein protein4, isoform b protein.
          Length = 568

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +1

Query: 295 KQTNLKTWVIQTRRSLKKKEMSQMKSALKQ 384
           ++ NLK  + Q R+  ++KEM +++S L++
Sbjct: 169 RELNLKRTLAQKRKRQREKEMEELESILRE 198


>AF100304-3|AAP82634.1|  542|Caenorhabditis elegans Gex interacting
           protein protein4, isoform c protein.
          Length = 542

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +1

Query: 295 KQTNLKTWVIQTRRSLKKKEMSQMKSALKQ 384
           ++ NLK  + Q R+  ++KEM +++S L++
Sbjct: 169 RELNLKRTLAQKRKRQREKEMEELESILRE 198


>AF100304-2|AAU20837.1|  564|Caenorhabditis elegans Gex interacting
           protein protein4, isoform f protein.
          Length = 564

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +1

Query: 295 KQTNLKTWVIQTRRSLKKKEMSQMKSALKQ 384
           ++ NLK  + Q R+  ++KEM +++S L++
Sbjct: 165 RELNLKRTLAQKRKRQREKEMEELESILRE 194


>AF100304-1|AAC68913.1|  545|Caenorhabditis elegans Gex interacting
           protein protein4, isoform a protein.
          Length = 545

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +1

Query: 295 KQTNLKTWVIQTRRSLKKKEMSQMKSALKQ 384
           ++ NLK  + Q R+  ++KEM +++S L++
Sbjct: 146 RELNLKRTLAQKRKRQREKEMEELESILRE 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,371,256
Number of Sequences: 27780
Number of extensions: 175058
Number of successful extensions: 422
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)