BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322D02f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 25 1.5
AY344838-1|AAR05809.1| 221|Anopheles gambiae TEP4 protein. 25 2.0
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 25.0 bits (52), Expect = 1.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 239 AVKYFNNNHEIHSNDILNLXTGFFQI---LMKIPHSLGI 346
A+ FN NH++ DI + GF I I HSLG+
Sbjct: 553 ALLLFNKNHDLFWEDIGQVFDGFHAINENEFDIFHSLGL 591
>AY344838-1|AAR05809.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 24.6 bits (51), Expect = 2.0
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 251 FNNNHEIHSNDILNLXTGFFQI---LMKIPHSLGI 346
++NNH+I D+ N+ F+ + + HSLG+
Sbjct: 48 YSNNHDIFWEDVWNVFDKFYSVERNEFDLFHSLGL 82
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,625
Number of Sequences: 2352
Number of extensions: 5964
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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