Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322D01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 33 0.12
Z81077-11|CAB03068.2| 244|Caenorhabditis elegans Hypothetical p... 29 1.5
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 1.5
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 2.0
U43316-1|AAC46993.1| 525|Caenorhabditis elegans transmembrane r... 29 2.7
AC006736-1|AAF60492.1| 525|Caenorhabditis elegans Abnormal cell... 29 2.7
U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical pr... 28 3.5
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF125963-3|AAD14744.2| 356|Caenorhabditis elegans Serpentine re... 28 3.5
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical ... 27 6.2
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 400 LFKRASFSVTFSKLLIKSCKVLGALSLTKTLILLD--SVLWQSLLFISTVLF 251
L K+A+F TFS +L + L ALS T I +D +VL + F+S LF
Sbjct: 555 LIKKAAFLRTFSDMLNTASPFLVALSTFATFIYIDPKNVLTPEIAFVSLTLF 606
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 400 LFKRASFSVTFSKLLIKSCKVLGALSLTKTLILLD--SVLWQSLLFISTVLF 251
L K+A+F TFS +L + L ALS T I +D +VL + F+S LF
Sbjct: 555 LIKKAAFLRTFSDMLNTASPFLVALSTFATFIYIDPKNVLTPEIAFVSLTLF 606
>Z81077-11|CAB03068.2| 244|Caenorhabditis elegans Hypothetical
protein F36A2.11 protein.
Length = 244
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 303 NINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVEHL 425
N+N ++D+ T QDF+ L++ E + + K GY+E++
Sbjct: 35 NVNKKITDETEMT-QDFMNDLKHYQEFDETVTKCAGYLENV 74
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 225 DLSIDEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEK-EALLNK 401
D ++++++ N D + D + SN+ V + LQD ++ + V EK EA L +
Sbjct: 1287 DAKVEQKSEENWGDWGEDDAEAATESNVVVSTLQSTVAELQDRLKFQKEVIEKAEAELIE 1346
Query: 402 TMGYVEHL 425
T + L
Sbjct: 1347 TQEKYDEL 1354
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 222 QDLSIDEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNK 401
Q+LS+ + +T+D+N +++ SDK + D R + + EALL +
Sbjct: 2473 QELSVIYDMPTSTIDLNMLQGIEDNLNSLPAEESDKIREKINDLRRRKQESDQAEALLQE 2532
Query: 402 TMGYVEHLVDNVLNYERIKII-DGVEIKIKND 494
+ V + + ++ ++ I DG+ + D
Sbjct: 2533 -LSVVSDMPASTIDINMLQSIEDGLSTLLSED 2563
>U43316-1|AAC46993.1| 525|Caenorhabditis elegans transmembrane
receptor protein.
Length = 525
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 171 DSRSAIVLFYNRSSVMFVSLGPFLCGLSKLITVH 70
+S + ++LF + SSV+ L F+ GLS+L +H
Sbjct: 212 ESATRLLLFLSLSSVILTILSVFIVGLSRLEMLH 245
>AC006736-1|AAF60492.1| 525|Caenorhabditis elegans Abnormal cell
migration protein1, isoform a protein.
Length = 525
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 171 DSRSAIVLFYNRSSVMFVSLGPFLCGLSKLITVH 70
+S + ++LF + SSV+ L F+ GLS+L +H
Sbjct: 212 ESATRLLLFLSLSSVILTILSVFIVGLSRLEMLH 245
>U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical
protein F59A3.2b protein.
Length = 687
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 366 ENVTEKEALLN--KTMGYVEHLVDNVLNYERIKIIDG 470
E+ +E LN + +V ++DNVLN +++KI DG
Sbjct: 356 ESSYNREMTLNDDRIEQFVVKMIDNVLNTKKLKIFDG 392
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 366 ENVTEKEALLN--KTMGYVEHLVDNVLNYERIKIIDG 470
E+ +E LN + +V ++DNVLN +++KI DG
Sbjct: 356 ESSYNREMTLNDDRIEQFVVKMIDNVLNTKKLKIFDG 392
>AF125963-3|AAD14744.2| 356|Caenorhabditis elegans Serpentine
receptor, class h protein10 protein.
Length = 356
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 521 FSLXVYYFSIVFNFDFNSINY 459
F L VY SIVF+FD N + Y
Sbjct: 272 FPLFVYMTSIVFHFDGNDVGY 292
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical protein
ZK270.1 protein.
Length = 983
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -2
Query: 439 NTLSTKCSTYPIVLFKRASFSVTFSKLLIKSCKVLGALSLTKTLILLDSVLW 284
+T+ CS + L+ F T L + C + G + L LILLDS+ W
Sbjct: 892 STILCVCSLLFVNLYMAEVFVKTMV-LCVVLCNLHGLVFLPAILILLDSIRW 942
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical protein
ZK270.1 protein.
Length = 983
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -2
Query: 439 NTLSTKCSTYPIVLFKRASFSVTFSKLLIKSCKVLGALSLTKTLILLDSVLW 284
+T+ CS + L+ F T L + C + G + L LILLDS+ W
Sbjct: 892 STILCVCSLLFVNLYMAEVFVKTMV-LCVVLCNLHGLVFLPAILILLDSIRW 942
>AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical
protein F07G11.3 protein.
Length = 529
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -3
Query: 186 LKLKCDSRSAIVLFYNRSSVMFVSLGPFLCGLSKLITVHLYR 61
L LKC + LFYN GP C + +T+ R
Sbjct: 455 LVLKCYNEKYYDLFYNNRKTEITCPGPHFCDFKQHLTIKCMR 496
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +3
Query: 234 IDEETKNNTVDINKSDCHSTESSNI---NVLVSDKAPSTLQDFIRSLEN-----VTEKEA 389
+D+ N +V I +S+ ST+ + I +V + + + IR L+N TEK+
Sbjct: 65 VDKAGLNESVIIERSNKVSTQETRIYRRDVTLLEDDLKQKESQIRILQNRCLRLETEKQK 124
Query: 390 LLNKTMGYVEHLVDNVLNYERI 455
+ + GY E L +N + E +
Sbjct: 125 MQDTISGYQEDLKENEIRIENL 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,019,686
Number of Sequences: 27780
Number of extensions: 156141
Number of successful extensions: 508
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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