Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322C12f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024880-2|AAF60914.4|  665|Caenorhabditis elegans Hypothetical ...    30   1.2  
AC024880-1|AAR12985.1|  634|Caenorhabditis elegans Hypothetical ...    30   1.2  
U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF003385-4|AAB54244.1|  333|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z35597-3|CAA84646.2|  498|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical...    27   8.1  
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical...    27   8.1  
AF068709-5|AAC19250.2|  332|Caenorhabditis elegans Serpentine re...    27   8.1  

>AC024880-2|AAF60914.4|  665|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.2a protein.
          Length = 665

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 341 SVFLLCLVLLNIYFFYNLSTTKPTPLIQSRKAEAMQNVHKEINDH 475
           SVF++  +LL I  FY + TT+   L Q +  E      KE+  H
Sbjct: 27  SVFVVLFLLLTILLFYFIFTTRDVYLSQKQALEEEDIKKKEVAAH 71


>AC024880-1|AAR12985.1|  634|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.2b protein.
          Length = 634

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 341 SVFLLCLVLLNIYFFYNLSTTKPTPLIQSRKAEAMQNVHKEINDH 475
           SVF++  +LL I  FY + TT+   L Q +  E      KE+  H
Sbjct: 27  SVFVVLFLLLTILLFYFIFTTRDVYLSQKQALEEEDIKKKEVAAH 71


>U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical
           protein C44B7.10 protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 380 FFYNLSTTKPTPLIQSRKAEAMQNVHKEINDHFAHLKXRT 499
           F + ++ T PTPL+QS    A+ N   +I  H  HL+  T
Sbjct: 57  FVHGIAAT-PTPLLQSLSEHAVANNLNKIKLHHLHLEGAT 95


>AF003385-4|AAB54244.1|  333|Caenorhabditis elegans Hypothetical
           protein R08F11.2 protein.
          Length = 333

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 273 EYISLVKHAINIALCR*ITCLEYRSFCFV 359
           EY + + H +N  L   +TCL Y SFCFV
Sbjct: 195 EYAN-IPHGVNNFLVVGLTCLLYVSFCFV 222


>Z35597-3|CAA84646.2|  498|Caenorhabditis elegans Hypothetical
           protein C36E8.3 protein.
          Length = 498

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 338 ISVFLLCLVLLNIYFFYNLSTTKPTPLIQSR 430
           I VFL+C+V    Y +YN  TT    LI+ R
Sbjct: 449 IVVFLVCIVAWLAYAYYNPHTTSGQILIKYR 479


>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein
            Y37A1B.17b protein.
          Length = 1467

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 407  PTPLIQSRKAEAMQNVHKEIND 472
            P PLI SR   A++NV+  +ND
Sbjct: 1354 PQPLIPSRPEPAVKNVYPSLND 1375


>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
            Y37A1B.17a protein.
          Length = 1538

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 407  PTPLIQSRKAEAMQNVHKEIND 472
            P PLI SR   A++NV+  +ND
Sbjct: 1354 PQPLIPSRPEPAVKNVYPSLND 1375


>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
            protein Y37A1B.17b protein.
          Length = 1467

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 407  PTPLIQSRKAEAMQNVHKEIND 472
            P PLI SR   A++NV+  +ND
Sbjct: 1354 PQPLIPSRPEPAVKNVYPSLND 1375


>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
            protein Y37A1B.17a protein.
          Length = 1538

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 407  PTPLIQSRKAEAMQNVHKEIND 472
            P PLI SR   A++NV+  +ND
Sbjct: 1354 PQPLIPSRPEPAVKNVYPSLND 1375


>AF068709-5|AAC19250.2|  332|Caenorhabditis elegans Serpentine
           receptor, class t protein29 protein.
          Length = 332

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 273 EYISLVKHAINIALCR*ITCLEYRSFCFV 359
           EY + + H +N  L   ITCL Y SFC V
Sbjct: 195 EYAN-IPHGVNNFLVVGITCLLYVSFCLV 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,251,340
Number of Sequences: 27780
Number of extensions: 177866
Number of successful extensions: 468
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)