Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322C06f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-30|CAB55134.2| 269|Caenorhabditis elegans Hypothetical... 50 1e-06
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 29 2.0
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AL117204-30|CAB55134.2| 269|Caenorhabditis elegans Hypothetical
protein Y116A8C.27 protein.
Length = 269
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/91 (27%), Positives = 40/91 (43%)
Frame = -2
Query: 397 RHFLSYDFAALTAINFGVEALKSPILMLACMERRXXXXXXXXXXXXXXEYQLERWGRVPW 218
R ++F AL + + E++KS ++ + Q E WG V W
Sbjct: 178 RWIRQHNFPALVGLQYATESVKSFVIAYNAIRHHIDPDTAIDAATLEQRTQAETWGNVEW 237
Query: 217 AHGLSQADLTARVSAALLLVHCATEKHAIKT 125
AHG+ + +L R+SAA L V+ + KT
Sbjct: 238 AHGIEREELMTRLSAACLFVYFNSNNFTSKT 268
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 157 VRGAGRRTRAPSGR-PGSARAPTARGPSAPADIL 255
+R R T AP+ P ++ APT G +PADIL
Sbjct: 78 IRNQARPTPAPAAATPTASSAPTMGGMGSPADIL 111
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 157 VRGAGRRTRAPSGR-PGSARAPTARGPSAPADIL 255
+R R T AP+ P ++ APT G +PADIL
Sbjct: 78 IRNQARPTPAPAAATPTASSAPTMGGMGSPADIL 111
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 163 GAGRRTRAPSGRPGSARAPTARGPSAPA 246
G G P+G PG A AP A GP P+
Sbjct: 124 GNGPCITCPAGAPGPAGAPGAPGPQGPS 151
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 163 GAGRRTRAPSGRPGSARAPTARGPSAPA 246
G G P+G PG A AP A GP P+
Sbjct: 124 GNGPCITCPAGAPGPAGAPGAPGPQGPS 151
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 181 RAPSGRPGSARAPTARGPSAPA--DILLQVLLTIQLPRVQRGAP 306
RAP P S++ P G +AP D+L ++L + + ++ AP
Sbjct: 818 RAPQALPTSSQTPPTSGSAAPPVDDLLSEILSGAKTTKTRKAAP 861
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 181 RAPSGRPGSARAPTARGPSAP 243
+ P+G PG A AP A GP P
Sbjct: 134 KCPAGSPGPAGAPGAPGPQGP 154
>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical protein
F55B11.1 protein.
Length = 1358
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 365 DSNKFRCRGIKVTDLNVGV-YGAPRCTRGSCIV 270
DSNKFR RGI +T G+ +G + + +V
Sbjct: 1016 DSNKFRKRGIYLTPTRFGIGFGLKQLNQAGALV 1048
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 239 ALGPRAVGARAE--PGRPDGARVRRPAPRT 156
A PRA+ +RA P RP R PAPRT
Sbjct: 263 ASAPRALTSRAPAGPSRPTTTRNAAPAPRT 292
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 239 ALGPRAVGARAE--PGRPDGARVRRPAPRT 156
A PRA+ +RA P RP R PAPRT
Sbjct: 263 ASAPRALTSRAPAGPSRPTTTRNAAPAPRT 292
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 239 ALGPRAVGARAE--PGRPDGARVRRPAPRT 156
A PRA+ +RA P RP R PAPRT
Sbjct: 263 ASAPRALTSRAPAGPSRPTTTRNAAPAPRT 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,525,891
Number of Sequences: 27780
Number of extensions: 194849
Number of successful extensions: 689
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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