Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322C06f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   3.3  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = +3

Query: 318 IKIGDFNASTPKFIAVSAAKSYDRKCRANTALVSVKTGGGC 440
           + +G+  AS+P++++ +A  S     R  ++  +     GC
Sbjct: 817 LMVGNSPASSPRYLSAAATSSTSTSPRPASSTAATLVLSGC 857


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 147 LRNMPSKLNLPKIHNEVNT 91
           LRN+    N P++H  +NT
Sbjct: 94  LRNIVQFRNTPEVHQAINT 112


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 358 LLSVLRNHMIENAELT 405
           L+++LRNH +E  E T
Sbjct: 458 LITILRNHKVEVCEKT 473


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,765
Number of Sequences: 438
Number of extensions: 2226
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)