Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322B09f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p pro... 47 2e-05
AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein. 47 2e-05
AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-li... 47 2e-05
AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA... 47 2e-05
AY071210-1|AAL48832.1| 580|Drosophila melanogaster RE25570p pro... 31 0.95
AY069695-1|AAL39840.1| 1178|Drosophila melanogaster LD46661p pro... 31 0.95
AE014298-1841|AAG22351.2| 580|Drosophila melanogaster CG4353-PB... 31 0.95
AE014298-1840|AAN09646.1| 1178|Drosophila melanogaster CG4353-PA... 31 0.95
AY075378-1|AAL68219.1| 163|Drosophila melanogaster LD08233p pro... 28 8.8
>AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p
protein.
Length = 90
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/26 (84%), Positives = 24/26 (92%), Gaps = 1/26 (3%)
Frame = +3
Query: 447 MADEKKG-ENEHINLKVLGQDNAIVQ 521
M+DEKKG E EHINLKVLGQDNA+VQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQ 26
>AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein.
Length = 90
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/26 (84%), Positives = 24/26 (92%), Gaps = 1/26 (3%)
Frame = +3
Query: 447 MADEKKG-ENEHINLKVLGQDNAIVQ 521
M+DEKKG E EHINLKVLGQDNA+VQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQ 26
>AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-like
protein SMT3 protein.
Length = 90
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/26 (84%), Positives = 24/26 (92%), Gaps = 1/26 (3%)
Frame = +3
Query: 447 MADEKKG-ENEHINLKVLGQDNAIVQ 521
M+DEKKG E EHINLKVLGQDNA+VQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQ 26
>AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA
protein.
Length = 90
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/26 (84%), Positives = 24/26 (92%), Gaps = 1/26 (3%)
Frame = +3
Query: 447 MADEKKG-ENEHINLKVLGQDNAIVQ 521
M+DEKKG E EHINLKVLGQDNA+VQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQ 26
>AY071210-1|AAL48832.1| 580|Drosophila melanogaster RE25570p
protein.
Length = 580
Score = 31.1 bits (67), Expect = 0.95
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Frame = +2
Query: 5 YLALDGVYHPLRAALSSNPTLRSVPLAAT---LRRY---GPG-TLYGKTAP-FKTNLDRS 160
Y L + S++PT +P T LRRY GPG ++ +P LDR
Sbjct: 437 YRTLSAASSSSNTSQSTSPTTEPLPGGGTSSFLRRYASSGPGGSISTPPSPHILAGLDRR 496
Query: 161 RRDEKAEPPEHHISRYRLKQRDSVLGYI--PVRSPLLRKSWLVSFPPL 298
R PP ++ + L R ++L P SPLL + ++ + PPL
Sbjct: 497 HRSPDP-PPRYNRGQSPLLLRKNLLELSGQPPGSPLLHRRYVSASPPL 543
>AY069695-1|AAL39840.1| 1178|Drosophila melanogaster LD46661p protein.
Length = 1178
Score = 31.1 bits (67), Expect = 0.95
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Frame = +2
Query: 5 YLALDGVYHPLRAALSSNPTLRSVPLAAT---LRRY---GPG-TLYGKTAP-FKTNLDRS 160
Y L + S++PT +P T LRRY GPG ++ +P LDR
Sbjct: 1035 YRTLSAASSSSNTSQSTSPTTEPLPGGGTSSFLRRYASSGPGGSISTPPSPHILAGLDRR 1094
Query: 161 RRDEKAEPPEHHISRYRLKQRDSVLGYI--PVRSPLLRKSWLVSFPPL 298
R PP ++ + L R ++L P SPLL + ++ + PPL
Sbjct: 1095 HRSPDP-PPRYNRGQSPLLLRKNLLELSGQPPGSPLLHRRYVSASPPL 1141
>AE014298-1841|AAG22351.2| 580|Drosophila melanogaster CG4353-PB,
isoform B protein.
Length = 580
Score = 31.1 bits (67), Expect = 0.95
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Frame = +2
Query: 5 YLALDGVYHPLRAALSSNPTLRSVPLAAT---LRRY---GPG-TLYGKTAP-FKTNLDRS 160
Y L + S++PT +P T LRRY GPG ++ +P LDR
Sbjct: 437 YRTLSAASSSSNTSQSTSPTTEPLPGGGTSSFLRRYASSGPGGSISTPPSPHILAGLDRR 496
Query: 161 RRDEKAEPPEHHISRYRLKQRDSVLGYI--PVRSPLLRKSWLVSFPPL 298
R PP ++ + L R ++L P SPLL + ++ + PPL
Sbjct: 497 HRSPDP-PPRYNRGQSPLLLRKNLLELSGQPPGSPLLHRRYVSASPPL 543
>AE014298-1840|AAN09646.1| 1178|Drosophila melanogaster CG4353-PA,
isoform A protein.
Length = 1178
Score = 31.1 bits (67), Expect = 0.95
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Frame = +2
Query: 5 YLALDGVYHPLRAALSSNPTLRSVPLAAT---LRRY---GPG-TLYGKTAP-FKTNLDRS 160
Y L + S++PT +P T LRRY GPG ++ +P LDR
Sbjct: 1035 YRTLSAASSSSNTSQSTSPTTEPLPGGGTSSFLRRYASSGPGGSISTPPSPHILAGLDRR 1094
Query: 161 RRDEKAEPPEHHISRYRLKQRDSVLGYI--PVRSPLLRKSWLVSFPPL 298
R PP ++ + L R ++L P SPLL + ++ + PPL
Sbjct: 1095 HRSPDP-PPRYNRGQSPLLLRKNLLELSGQPPGSPLLHRRYVSASPPL 1141
>AY075378-1|AAL68219.1| 163|Drosophila melanogaster LD08233p
protein.
Length = 163
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 476 FVFSLLFISHFEINVVLETINTKL*IDKLIWYLFSQTNA*MTA 348
F+ + L HFE+ VL + K++W+L ++N + A
Sbjct: 88 FIVAALCFYHFELVFVLRVTSRGSSTSKVLWFLIGESNRTLAA 130
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,421,137
Number of Sequences: 53049
Number of extensions: 461965
Number of successful extensions: 1234
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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