Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322B07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-55|CAN99710.1|   74|Caenorhabditis elegans Hypothetical p...    92   3e-19
Z71265-2|CAA95834.2|  128|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z68104-1|CAA92112.1|  866|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U28733-1|AAA68302.2|  982|Caenorhabditis elegans Patched related...    27   8.1  

>Z99281-55|CAN99710.1|   74|Caenorhabditis elegans Hypothetical
           protein Y57G11C.12a protein.
          Length = 74

 Score = 91.9 bits (218), Expect = 3e-19
 Identities = 38/70 (54%), Positives = 59/70 (84%)
 Frame = +2

Query: 116 ETIQKQIQQDWANREYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLE 295
           E +Q+Q++ DW NRE+ ++I  +IK I +FL+SF++SCR++LATL++KL  LERK+++LE
Sbjct: 5   EAVQQQLKDDWDNREFEQIIADNIKNIANFLSSFELSCRTKLATLSDKLNLLERKVEFLE 64

Query: 296 ACVTKGETLT 325
           A VTKG+TL+
Sbjct: 65  ARVTKGDTLS 74


>Z71265-2|CAA95834.2|  128|Caenorhabditis elegans Hypothetical
           protein M05B5.2 protein.
          Length = 128

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 201 SVIFFMLPVITSMYSLLAQSCWICFC 124
           +V+  +L  I  +  L+A SCW C+C
Sbjct: 90  AVVAIILAAIVLLLVLIAMSCWCCWC 115


>Z68104-1|CAA92112.1|  866|Caenorhabditis elegans Hypothetical
           protein F08B12.1 protein.
          Length = 866

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +2

Query: 149 ANREYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVT 307
           AN    + +T  +++I +    F    RSRL  L   +TSL+ K+  L+  V+
Sbjct: 660 ANSGRPKAVTLVLEQIRELEIQFAKPLRSRLEALYSNITSLDEKLSQLQVPVS 712


>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
            R07G3.3c protein.
          Length = 1316

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +2

Query: 158  EYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVTKGET 319
            + IE     ++K T+ LNS +   R + A  +EKL  L  + + L A +T   T
Sbjct: 1071 QMIEHAERLLQKKTEELNSIEEENRQKQAEYDEKLAQLSLQYESLSANLTNQNT 1124


>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
            R07G3.3a protein.
          Length = 1982

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +2

Query: 158  EYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVTKGET 319
            + IE     ++K T+ LNS +   R + A  +EKL  L  + + L A +T   T
Sbjct: 1071 QMIEHAERLLQKKTEELNSIEEENRQKQAEYDEKLAQLSLQYESLSANLTNQNT 1124


>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
            R07G3.3b protein.
          Length = 1987

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +2

Query: 158  EYIEVITGSIKKITDFLNSFDMSCRSRLATLNEKLTSLERKIDYLEACVTKGET 319
            + IE     ++K T+ LNS +   R + A  +EKL  L  + + L A +T   T
Sbjct: 1071 QMIEHAERLLQKKTEELNSIEEENRQKQAEYDEKLAQLSLQYESLSANLTNQNT 1124


>Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical
           protein R05H5.6 protein.
          Length = 337

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = -3

Query: 201 SVIFFMLPVITSMYSLLAQSCWICFCIVSLGGVDIIYN 88
           S+ +FM+P  TS Y +     W+C+ ++++  V++++N
Sbjct: 167 SISYFMVPD-TSGYKMN----WLCYSLLAINSVNLVFN 199


>U28733-1|AAA68302.2|  982|Caenorhabditis elegans Patched related
           family protein 6 protein.
          Length = 982

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 175 DHFYVFSVGPILLDLFLYCFSWW 107
           D++YVF + P++L     C  +W
Sbjct: 26  DYYYVFLIAPVILTAICSCGFYW 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,723,763
Number of Sequences: 27780
Number of extensions: 201275
Number of successful extensions: 655
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)