Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322B07f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 25 0.62
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 25 0.62
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 25 0.62
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 1.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 24 1.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 1.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 2.5
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 3.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 3.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 3.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 3.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 3.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 3.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 3.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 3.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 3.3
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 21 7.7
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.62
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 146 WANREYIEVITGSIKK-ITDFLNSFDMSCRSRLATLNE 256
+ NREYI V++ ++K + + N D++ R A +NE
Sbjct: 372 YINREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNE 409
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.62
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 146 WANREYIEVITGSIKK-ITDFLNSFDMSCRSRLATLNE 256
+ NREYI V++ ++K + + N D++ R A +NE
Sbjct: 372 YINREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNE 409
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.62
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 146 WANREYIEVITGSIKK-ITDFLNSFDMSCRSRLATLNE 256
+ NREYI V++ ++K + + N D++ R A +NE
Sbjct: 372 YINREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNE 409
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.1
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = -2
Query: 226 GHVERIEEV----GNFFYAACDHFYVFSVGPILLDLFL 125
GH +R E+ GN+ AC+ +V S+G L+ +++
Sbjct: 192 GHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 229
Score = 21.0 bits (42), Expect = 7.7
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1
Query: 439 WILYVHISN 465
WI+Y+HIS+
Sbjct: 424 WIIYLHISD 432
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.8 bits (49), Expect = 1.1
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = -2
Query: 226 GHVERIEEV----GNFFYAACDHFYVFSVGPILLDLFL 125
GH +R E+ GN+ AC+ +V S+G L+ +++
Sbjct: 131 GHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYI 168
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 1.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 383 IIELISNAYNYMEFIEDYFMLRFHL 309
II +SN YNY + +Y L +++
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLHYNI 338
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 2.5
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = -2
Query: 253 IQSSKARSTGHVERIEEV----GNFFYAACDHFYVFSVGPILLDLFL 125
++ + R GH +R + GN+ AC+ +V S+G L+ +++
Sbjct: 183 VELPQFRVLGHRQRHSTIHLSTGNYSRLACEIQFVRSMGYYLIQIYI 229
Score = 21.0 bits (42), Expect = 7.7
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1
Query: 439 WILYVHISN 465
WI+Y+HIS+
Sbjct: 424 WIIYLHISD 432
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 383 IIELISNAYNYMEFIEDYFMLRFHL 309
II +SN YNY + +Y L +++
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 383 IIELISNAYNYMEFIEDYFMLRFHL 309
II +SN YNY + +Y L +++
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 383 IIELISNAYNYMEFIEDYFMLRFHL 309
II +SN YNY + +Y L +++
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 383 IIELISNAYNYMEFIEDYFMLRFHL 309
II +SN YNY + +Y L +++
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNI 105
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 383 IIELISNAYNYMEFIEDYFMLRFHL 309
II +SN YNY + +Y L +++
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 383 IIELISNAYNYMEFIEDYFMLRFHL 309
II +SN YNY + +Y L +++
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 383 IIELISNAYNYMEFIEDYFMLRFHL 309
II +SN YNY + +Y L +++
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 383 IIELISNAYNYMEFIEDYFMLRFHL 309
II +SN YNY + +Y L +++
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 383 IIELISNAYNYMEFIEDYFMLRFHL 309
II +SN YNY + +Y L +++
Sbjct: 303 IISSLSNNYNYNNYNNNYKPLYYNI 327
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 145 LGQQRIHRSDHRQHKKNYR 201
LG QRIH R K YR
Sbjct: 38 LGPQRIHTVRTRGGNKKYR 56
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,228
Number of Sequences: 438
Number of extensions: 2955
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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