Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322B05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        25   0.62 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   1.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   7.7  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
 Frame = +1

Query: 49  NSKPATDNNDPTAAPQGSNR*STSSATDSCDPEATSHSYHHVDQQPN---DAGHPATDSG 219
           ++ P+   + P  +   ++    +  T S  P  ++ + HH  QQ      A   AT S 
Sbjct: 59  HNSPSPTGSSPQHSGSSASTSPAARTTSSMYPYVSAAAAHHHHQQQQAVAAAAFGATSSM 118

Query: 220 EPAIAPRGATAYIGVEQPARADECTAEGERSQSRATSEESSREPTDGD 363
            P      A++   +   A  D  TA G++S     S   +  P   D
Sbjct: 119 VPGFGSTAASS-AALAAAAAVDAATA-GDKSCRYTASLAGNVAPASAD 164


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 43  SNNSKPATDNNDPTAAPQGSNR*STSSATDSCDPEATSHSYHHVD 177
           S++S+    N   T +PQ       SS  +   P  +  SYHH+D
Sbjct: 129 SDHSRDQEQNLYLTPSPQ-----MYSSGGEEITPRQSHQSYHHMD 168


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 40  PSNNSKPATDNNDPTAAPQGSNR*STSSATDSCDPEATSHS-YHHVDQQ 183
           P +++KP+  +++PT    G    ++S  T      AT+ + Y  ++++
Sbjct: 266 PRSHAKPSLIDDEPTEVTIGGGGTTSSRRTTGSRAAATTTTVYQFIEER 314


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 40  PSNNSKPATDNNDPTAAPQGSNR*STSSATDSCDPEATSHS-YHHVDQQ 183
           P +++KP+  +++PT    G    ++S  T      AT+ + Y  ++++
Sbjct: 266 PRSHAKPSLIDDEPTEVTIGGGGTTSSRRTTGSRAAATTTTVYQFIEER 314


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 40  PSNNSKPATDNNDPTAAPQGSNR*STSSATDSCDPEATSHS-YHHVDQQ 183
           P +++KP+  +++PT    G    ++S  T      AT+ + Y  ++++
Sbjct: 266 PRSHAKPSLIDDEPTEVTIGGGGTTSSRRTTGSRAAATTTTVYQFIEER 314


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 305 NVHRVVQPQRSQVVNQPMATPASVVQTDTKNTVIQSG 415
           N H+V+Q +   VV Q   T   +V       + QSG
Sbjct: 334 NEHQVLQRESFDVVAQNEETLQMIVSMKIMENLPQSG 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.127    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,257
Number of Sequences: 438
Number of extensions: 2659
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)