Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322B03f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75525-5|CAA99764.1| 162|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 31 0.66
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 31 0.66
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical p... 29 2.7
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 3.5
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 3.5
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 4.7
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 4.7
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 4.7
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein. 27 8.1
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 27 8.1
>Z75525-5|CAA99764.1| 162|Caenorhabditis elegans Hypothetical
protein C03D6.8 protein.
Length = 162
Score = 50.8 bits (116), Expect = 6e-07
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = -2
Query: 520 PXKYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSP 341
P KY R ++ KTIEA K + ++ +R N I +RL+ G+ V+ + + +V + + LI++P
Sbjct: 78 PVKYERAMFQKTIEAAKTISALKTKRYGNLIRKRLQPGKIVQKKGLLAKVDKKMHLIRAP 137
Query: 340 AA---GLKQRQALEATEMEVEPET 278
A G+K R A + + ET
Sbjct: 138 VANRDGVKTRAAAKEKKTAESMET 161
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 30.7 bits (66), Expect = 0.66
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1
Query: 398 RVAKRRARSPERHLFDKVTSGWSETATSFR-SHRNGSGTRDNRSCGR*RQET 246
R K+R +SP R D GW T S + R SG NRS R Q T
Sbjct: 477 RKKKKRPKSPNRSKKDSRAFGWDSTDESDEDTRRRRSGRSQNRSSERKFQTT 528
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 30.7 bits (66), Expect = 0.66
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1
Query: 398 RVAKRRARSPERHLFDKVTSGWSETATSFR-SHRNGSGTRDNRSCGR*RQET 246
R K+R +SP R D GW T S + R SG NRS R Q T
Sbjct: 477 RKKKKRPKSPNRSKKDSRAFGWDSTDESDEDTRRRRSGRSQNRSSERKFQTT 528
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/71 (32%), Positives = 27/71 (38%)
Frame = -1
Query: 422 AIETGQRGRVAKRRARSPERHLFDKVTSGWSETATSFRSHRNGSGTRDNRSCGR*RQETD 243
A+ R R A R SP + T+G S+ S S G GTR S R R
Sbjct: 44 AVARRGRNRAAARERASPYSRSRIRSTAGTSDAGPSSSSSVRGRGTRGTTSARRGRGSA- 102
Query: 242 Y*GSGHGTCNR 210
G T NR
Sbjct: 103 --RGGEATMNR 111
>Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Frame = -2
Query: 514 KYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQG----REVEWQRDVREVQRDISLIK 347
K E K IE +K+ + +++ + + R+G RE+E QR+ E QR L+
Sbjct: 69 KAAEERHNKAIEELKRSHKNDKKKLESELESIKRKGEKDVREIEQQREALEKQRTEDLVN 128
Query: 346 SPAAGLK----QRQALEATEMEVEPETIEVVDAKGRKQIIE 236
K + +A++ E + +E +D K ++ IE
Sbjct: 129 HQETMRKLNETKFEAIKKKRDEQQTLKMEEMDEKSKRMAIE 169
>Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Frame = -2
Query: 514 KYNRELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQG----REVEWQRDVREVQRDISLIK 347
K E K IE +K+ + +++ + + R+G RE+E QR+ E QR L+
Sbjct: 69 KAAEERHNKAIEELKRSHKNDKKKLESELESIKRKGEKDVREIEQQREALEKQRTEDLVN 128
Query: 346 SPAAGLK----QRQALEATEMEVEPETIEVVDAKGRKQIIE 236
K + +A++ E + +E +D K ++ IE
Sbjct: 129 HQETMRKLNETKFEAIKKKRDEQQTLKMEEMDEKSKRMAIE 169
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 28.7 bits (61), Expect = 2.7
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -2
Query: 505 RELWTKTIEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK 326
RE K E +K+ E ++ + + + RE E +++ RE +R+ K K
Sbjct: 197 REEKKKQKELLKEKERSERKEKERELEREKEKSREKEREKE-REKEREKEREKERE---K 252
Query: 325 QRQALEATEMEVEPETIEVVDAKGRKQIIEAPVMV 221
Q++ + E E E E +A+ +K+ PV++
Sbjct: 253 QKEREKEREKEREKEKKREEEARRKKEEASTPVII 287
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = -2
Query: 481 EAMKKVEEIRQRRSNNYIMQRLRQGREVE-WQRDVREVQRDISLIKSPAAGLKQRQA-LE 308
+A + EE+RQ + ++ ++R+R+G E++ + +R + + +K + Q +A +
Sbjct: 1774 DAARLAEELRQEQEHSMHIERIRKGLELQIKEMQIRLDDAENAALKGGKKIIAQLEARIR 1833
Query: 307 ATEMEVEPE 281
A E E++ E
Sbjct: 1834 AIEQELDGE 1842
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = -2
Query: 481 EAMKKVEEIRQRRSNNYIMQRLRQGREVE-WQRDVREVQRDISLIKSPAAGLKQRQA-LE 308
+A + EE+RQ + ++ ++R+R+G E++ + +R + + +K + Q +A +
Sbjct: 1774 DAARLAEELRQEQEHSMHIERIRKGLELQIKEMQIRLDDAENAALKGGKKIIAQLEARIR 1833
Query: 307 ATEMEVEPE 281
A E E++ E
Sbjct: 1834 AIEQELDGE 1842
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = -2
Query: 481 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK 326
+A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK
Sbjct: 1770 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALK 1815
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = -2
Query: 481 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK 326
+A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK
Sbjct: 1770 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALK 1815
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = -2
Query: 481 EAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLK 326
+A + EE+RQ + ++ + RLR+G E + ++E+Q + L ++ AA LK
Sbjct: 1773 DATRLAEELRQEQEHSQHVDRLRKGLE----QQLKEIQ--VRLDEAEAAALK 1818
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/88 (26%), Positives = 42/88 (47%)
Frame = -2
Query: 484 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 305
IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E
Sbjct: 351 IEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 409
Query: 304 TEMEVEPETIEVVDAKGRKQIIEAPVMV 221
++ +E E IE R I++ ++V
Sbjct: 410 HDL-LEKERIEQARVAERIANIQSRLIV 436
>Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical
protein F20C5.2a protein.
Length = 782
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/88 (26%), Positives = 42/88 (47%)
Frame = -2
Query: 484 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 305
IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E
Sbjct: 365 IEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 423
Query: 304 TEMEVEPETIEVVDAKGRKQIIEAPVMV 221
++ +E E IE R I++ ++V
Sbjct: 424 HDL-LEKERIEQARVAERIANIQSRLIV 450
>AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein.
Length = 782
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/88 (26%), Positives = 42/88 (47%)
Frame = -2
Query: 484 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 305
IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E
Sbjct: 365 IEMLREQLKQRKTRSRDGATQSFYDAERTKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 423
Query: 304 TEMEVEPETIEVVDAKGRKQIIEAPVMV 221
++ +E E IE R I++ ++V
Sbjct: 424 HDL-LEKERIEQARVAERIANIQSRLIV 450
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/88 (26%), Positives = 42/88 (47%)
Frame = -2
Query: 484 IEAMKKVEEIRQRRSNNYIMQRLRQGREVEWQRDVREVQRDISLIKSPAAGLKQRQALEA 305
IE +++ + R+ RS + Q + + D+ +Q+D SLIK L R+ E
Sbjct: 314 IEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDDSLIKHEKDRL-IREIQEK 372
Query: 304 TEMEVEPETIEVVDAKGRKQIIEAPVMV 221
++ +E E IE R I++ ++V
Sbjct: 373 HDL-LEKERIEQARVAERIANIQSRLIV 399
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,258,097
Number of Sequences: 27780
Number of extensions: 185630
Number of successful extensions: 625
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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