Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322B02f
         (415 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...   113   3e-25
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...   113   3e-25
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...   113   3e-25
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...   113   3e-25
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...   107   2e-23
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...   103   3e-22
AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a ...    41   0.002

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  113 bits (271), Expect = 3e-25
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = +3

Query: 105 HHHRIXMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNXDKLWTLVSEXTRLKYASAPDGKX 284
           HHHRI  DKYHPGYFGK+GM+++H ++N++FCP +N DKLWTLVSE TR+  A    G  
Sbjct: 39  HHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAA 98

Query: 285 PVINIVKAXXXXXXXXXXXPKQPVIV 362
           P+I++V++           PKQPVIV
Sbjct: 99  PIIDVVRSGYYKVLGKGKLPKQPVIV 124


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score =  113 bits (271), Expect = 3e-25
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = +3

Query: 105 HHHRIXMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNXDKLWTLVSEXTRLKYASAPDGKX 284
           HHHRI  DKYHPGYFGK+GM+++H ++N++FCP +N DKLWTLVSE TR+  A    G  
Sbjct: 38  HHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAA 97

Query: 285 PVINIVKAXXXXXXXXXXXPKQPVIV 362
           P+I++V++           PKQPVIV
Sbjct: 98  PIIDVVRSGYYKVLGKGKLPKQPVIV 123


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  113 bits (271), Expect = 3e-25
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = +3

Query: 105 HHHRIXMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNXDKLWTLVSEXTRLKYASAPDGKX 284
           HHHRI  DKYHPGYFGK+GM+++H ++N++FCP +N DKLWTLVSE TR+  A    G  
Sbjct: 39  HHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAA 98

Query: 285 PVINIVKAXXXXXXXXXXXPKQPVIV 362
           P+I++V++           PKQPVIV
Sbjct: 99  PIIDVVRSGYYKVLGKGKLPKQPVIV 124


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score =  113 bits (271), Expect = 3e-25
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = +3

Query: 105 HHHRIXMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNXDKLWTLVSEXTRLKYASAPDGKX 284
           HHHRI  DKYHPGYFGK+GM+++H ++N++FCP +N DKLWTLVSE TR+  A    G  
Sbjct: 39  HHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAA 98

Query: 285 PVINIVKAXXXXXXXXXXXPKQPVIV 362
           P+I++V++           PKQPVIV
Sbjct: 99  PIIDVVRSGYYKVLGKGKLPKQPVIV 124


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  107 bits (256), Expect = 2e-23
 Identities = 44/86 (51%), Positives = 60/86 (69%)
 Frame = +3

Query: 105 HHHRIXMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNXDKLWTLVSEXTRLKYASAPDGKX 284
           HHHRI  DKYHPGYFGK+GM++++ ++N++FCP +N DKLWTLVSE TR+  A    G  
Sbjct: 39  HHHRINFDKYHPGYFGKVGMKHYNLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAA 98

Query: 285 PVINIVKAXXXXXXXXXXXPKQPVIV 362
           P+I++V++            KQPVIV
Sbjct: 99  PIIDVVRSGYYKVLGKGKLAKQPVIV 124


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score =  103 bits (246), Expect = 3e-22
 Identities = 39/68 (57%), Positives = 54/68 (79%)
 Frame = +3

Query: 105 HHHRIXMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNXDKLWTLVSEXTRLKYASAPDGKX 284
           HHHRI  DKYHPGYFGK+GM+++H ++N++FCP +N DKLWTLVSE TR+  A    G  
Sbjct: 39  HHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAA 98

Query: 285 PVINIVKA 308
           P+I++V++
Sbjct: 99  PIIDVVRS 106


>AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a
           protein.
          Length = 34

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +3

Query: 207 LNXDKLWTLVSEXTRLKYASAPDGKXPVINIVKA 308
           +N DKLWTLVSE TR+  A    G  P+I++V++
Sbjct: 1   VNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 34


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,567,555
Number of Sequences: 237096
Number of extensions: 826514
Number of successful extensions: 1243
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)