Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322B01f
         (337 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50874-6|CAA90765.1|  759|Caenorhabditis elegans Hypothetical pr...   108   1e-24
AC006644-5|AAF39834.1|  786|Caenorhabditis elegans Hypothetical ...    29   1.1  
Z78018-3|CAB01444.1|  820|Caenorhabditis elegans Hypothetical pr...    28   1.9  
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr...    26   5.8  

>Z50874-6|CAA90765.1|  759|Caenorhabditis elegans Hypothetical
           protein R10E4.4 protein.
          Length = 759

 Score =  108 bits (259), Expect = 1e-24
 Identities = 51/90 (56%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
 Frame = -1

Query: 304 QVSTLDAAMTGSLAGAEGFTTEEDHEMLTRVEKQLKRRFAVGSQVSEQTIIQDFL-RQKY 128
           +VST++AA TG+LAG EGFT+  D E L R+E Q+K+RFA+G+ VSE  I+QDF+ RQ Y
Sbjct: 669 RVSTIEAAATGNLAGVEGFTSTADQEALNRIEVQMKKRFAIGTHVSEHLIVQDFVARQHY 728

Query: 127 PERAILKVIHMMXRRGELQHRLQRKMLYRL 38
            E  + KVI  + RRG+LQ ++QRKMLYR+
Sbjct: 729 RESLVKKVIDNLVRRGDLQQKMQRKMLYRV 758


>AC006644-5|AAF39834.1|  786|Caenorhabditis elegans Hypothetical
           protein F55A3.2 protein.
          Length = 786

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -1

Query: 313 VCSQVSTLDAAMTGSLAGAEGFTTEEDHEMLTRVEKQLKRRFAVGSQVSEQTIIQDF 143
           +C Q S +DA     +A A   T  E  E++ R+      RF    Q+S+++I + F
Sbjct: 101 ICKQ-SPMDAFFKSHVAQAHPATPSEASEVMRRLSDVRYSRFCQNGQISKESIQKMF 156


>Z78018-3|CAB01444.1|  820|Caenorhabditis elegans Hypothetical
           protein W07G4.3 protein.
          Length = 820

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -1

Query: 259 AEGFTTEEDHEMLTRVEKQLKRRFAVGSQVSEQTIIQDFLRQKY 128
           A G   +  HE+  ++  Q   R AV S++SE  +   +L+ K+
Sbjct: 191 APGKIPQRIHELYKKIGAQSAARLAVFSKISEYRLTGGYLKNKF 234


>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
            T05A12.4a protein.
          Length = 1622

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -1

Query: 247  TTEEDHEMLTRVEKQLKRRFAVGSQVSEQTIIQDFLRQKYPE-RAILKVIHMMXRRGELQ 71
            TT+E H +L     QL   F    +VS   + Q F+R    E RAI  + + +    ++ 
Sbjct: 932  TTQEVHLILNMYNIQLSMGFPQADRVSLDRLQQIFVRYFQLELRAIEFIANDLPIFSQMW 991

Query: 70   HRLQRKMLYRLS 35
             + +R ++Y++S
Sbjct: 992  TKDKRNLMYQVS 1003


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,181,090
Number of Sequences: 27780
Number of extensions: 96783
Number of successful extensions: 237
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)