Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322A12f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 31 0.10
SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyc... 28 0.97
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 27 2.2
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 26 3.0
SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|... 26 3.9
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 5.2
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 25 5.2
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 25 5.2
SPBC30B4.05 |kap109||karyopherin Kap109|Schizosaccharomyces pomb... 25 5.2
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.8
SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein] reductase|Schiz... 25 6.8
SPCC24B10.12 |||CGI121 family protein|Schizosaccharomyces pombe|... 25 9.0
SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter ... 25 9.0
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 31.1 bits (67), Expect = 0.10
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 95 LLFLNVSHNRITEIKQNELDNLNKLRTLDITNN 193
L+ LNVSHN ++ + ++ KL+ LDI+NN
Sbjct: 431 LISLNVSHNLSLDLPLDFMERCVKLKRLDISNN 463
Score = 29.1 bits (62), Expect = 0.42
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 95 LLFLNVSHNRITEIKQNELDNLNKLRTLDITNNPLA 202
L LN+S+N +TEI N + L+ L ++ N LA
Sbjct: 832 LKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELA 867
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 71 HPLTVLINLLFLNVSHNRITEIKQNELDNLNKLRTLDITNNPLA 202
H L+NL +L++S+N + L++L TL+ ++N L+
Sbjct: 519 HSTRYLVNLTYLDLSYNNFVTFPL-IITELSQLETLNFSHNLLS 561
>SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 364
Score = 27.9 bits (59), Expect = 0.97
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 404 EEIWERIDKDTEGNFDLKNTLDDGKFLMIPT 496
+++ ER K+ E NF++K DGK L I T
Sbjct: 77 DDVKERPVKELELNFEIKGICFDGKLLAIAT 107
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 26.6 bits (56), Expect = 2.2
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 8 AMIWLDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNRITEIKQNELDNLNKLRTLDIT 187
+++ LD+S ELT + + L L L LN++ N+IT + +L+ L+ L ++
Sbjct: 357 SLVSLDLSGNELTEI-----PYALGELPQLCSLNLASNKITGCRTFYHISLSHLQILVLS 411
Query: 188 NNPLACSRDFENL 226
N L EN+
Sbjct: 412 RNHLTSLSGLENV 424
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 86 LINLLFLNVSHNRITEIKQNELDNLNKLRTLDITNNPL 199
L+NL +L++S+N++ ++ L +L LR L + +N L
Sbjct: 667 LLNLQYLDISYNQLEDL--TGLSSLIHLRELKVDSNHL 702
Score = 26.2 bits (55), Expect = 3.0
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 5 PAMIWLDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNRITEIKQ--NELDNLNKLRTL 178
P + LD+SH ++ ++ PL ++ L + NRI +++ + L NL +L L
Sbjct: 891 PNLRVLDLSHNYISD---IESLKPLQMIHRLYLVG---NRIKKMRNLCDILANLKQLNVL 944
Query: 179 DITNNPL 199
D+ NPL
Sbjct: 945 DLRMNPL 951
>SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 712
Score = 25.8 bits (54), Expect = 3.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 191 NPLACSRDFENLMTWLNNHTVLPTGNSANVANMARDGKDDD 313
NPLA D + ++ +L+ H V TG V N ++DD
Sbjct: 332 NPLALGCDCKGVIHYLDAHFVNNTGEVETVKNAICIHEEDD 372
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 5.2
Identities = 16/73 (21%), Positives = 33/73 (45%)
Frame = +2
Query: 107 NVSHNRITEIKQNELDNLNKLRTLDITNNPLACSRDFENLMTWLNNHTVLPTGNSANVAN 286
N + I + Q + L + D++N L+ + +++ N + PT +++VAN
Sbjct: 667 NTRGDYIVQRTQQSANPLTNIEPQDMSN--LSTDINASDVVADSTNSILYPTSTASSVAN 724
Query: 287 MARDGKDDDATYS 325
DD T++
Sbjct: 725 TIASDVDDFGTFN 737
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 25.4 bits (53), Expect = 5.2
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 393 ADNGSTGWEITVVPQVLIVRKSQL*VASSSFPSLAILATLAELP 262
+ NG G EI+ VPQ I R+ V + F S + A++ LP
Sbjct: 115 SSNGKLGTEISEVPQPPIPRQLGE-VTTLKFASQGVRASILRLP 157
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 25.4 bits (53), Expect = 5.2
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 107 NVSHNRITEIKQNELDNLNKLRTLDITN---NPLACSRDFENLMTWLNNHTV 253
+VSHN + EL N N T ITN + +++ L L+NH V
Sbjct: 448 SVSHNTYRQNNLEELKNQNDYLTSQITNLEEGMVMLNKENTKLSEALSNHRV 499
>SPBC30B4.05 |kap109||karyopherin Kap109|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 967
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 311 DATYSWDFLTIKTCGTTVISHPVEPLSAVSDEEIW-ERIDKDT 436
DA Y + + TC + P+E +DEE++ + ID D+
Sbjct: 856 DAIYENLIIPLLTCILKLFEMPIEQAQTDADEELFMDEIDADS 898
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 386 LSAVSDEEIWERIDKDTEGNFDLKNTLDDGKFLMIPTL 499
L+ S+E + + + + T+ K T+D KF++ P++
Sbjct: 348 LAKQSNETLLQTLTEQTDQLLSFKETMDSFKFILGPSM 385
>SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein]
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 333 KSQL*VASSSFPSLAILATLAELPVGNTVWLFSHVMRFSK 214
+S + V S+FPS+A ATL+ P L HV++ +K
Sbjct: 135 RSLVPVDKSAFPSIAEAATLSVNPC-TAYCLLQHVVQLNK 173
>SPCC24B10.12 |||CGI121 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 174
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 389 SAVSDEEIWERIDKDTEGN 445
S +++EE +ER+DK EGN
Sbjct: 110 SKLTEEEEFERLDKLVEGN 128
>SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter
Str2 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 597
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 330 SQL*VA-SSSFPSLAILATLAELPVGNTVWL 241
SQL +A +SS + IL+ + ELP TVW+
Sbjct: 175 SQLIIADTSSLLNRGILSAIPELPYLATVWI 205
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,148,726
Number of Sequences: 5004
Number of extensions: 42956
Number of successful extensions: 148
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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