Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322A12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    34   8e-04
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   0.36 
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   3.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   5.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   5.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   5.8  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   7.7  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   7.7  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 34.3 bits (75), Expect = 8e-04
 Identities = 23/60 (38%), Positives = 31/60 (51%)
 Frame = +2

Query: 20  LDMSHAELTSLWKVDKNHPLTVLINLLFLNVSHNRITEIKQNELDNLNKLRTLDITNNPL 199
           LD+S  E+T L    +N PL  L  L  L++  N I EI  + L  L  LRT + + N L
Sbjct: 217 LDLSRNEITRL---QENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNSL 273



 Score = 32.7 bits (71), Expect = 0.002
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +2

Query: 65  KNHPLTVLINLLFLNVSHNRITEIKQNELDNLNKLRTLDITNN 193
           +N     L NL  L++  NRI E+K  E + L+ LR L + NN
Sbjct: 834 QNRTFNGLNNLQILHLEDNRIRELKGFEFERLSHLRELYLQNN 876



 Score = 31.5 bits (68), Expect = 0.005
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 86  LINLLFLNVSHNRITEIKQNELDNLNKLRTLDITNNPL 199
           LI L+ LN+S+N +T I      +L  L+ LD+ NN +
Sbjct: 334 LIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSI 371



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 104 LNVSHNRITEIKQNELDNLNKLRTLDITNN 193
           L+ SHNRITE+  + L   + +  L I NN
Sbjct: 600 LDASHNRITEL--SPLSVPDSVELLFINNN 627


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 10/35 (28%), Positives = 24/35 (68%)
 Frame = -3

Query: 243 LFSHVMRFSKSRLQANGLLVMSKVRSLFKLSNSFC 139
           LFS ++ F++    A  ++V++ +++L++  +SFC
Sbjct: 493 LFSDIVGFTEICSTATPMMVINMLQNLYEQFDSFC 527


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +2

Query: 107 NVSHNRITEIKQNELDNLNKL-RTLD 181
           N  ++ I ++KQ+  D +NK+  TLD
Sbjct: 165 NFKNSNIFQLKQHMRDTMNKIAETLD 190


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 445 ITLSVLVDSFPNFFVRYSR*WFNRMGN 365
           I L  +VDS+ N    Y++   N +GN
Sbjct: 337 IDLGYVVDSYGNHVKLYTKQGLNVLGN 363


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 445 ITLSVLVDSFPNFFVRYSR*WFNRMGN 365
           I L  +VDS+ N    Y++   N +GN
Sbjct: 337 IDLGYVVDSYGNHVKLYTKQGLNVLGN 363


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 263 GNSANVANMARDGKDDDATYSWDFL 337
           G+ A V   +R+G     TY W+FL
Sbjct: 443 GDGAAVKRKSREGS---TTYLWEFL 464


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 209 RDFENLMTWLNNHTVLPTGNSANVANMARDGK 304
           +DF+N +    +  +  TG +  + N   DGK
Sbjct: 20  KDFQNAIRMGQSICMAKTGINKQIINDVNDGK 51


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 323 SWDFLTIKTCGTTVISHPVEPLSAVSDEEIWERIDKDTEGNF 448
           +W  L  K     + SH +  LSA     I + ID + +G +
Sbjct: 244 AWQMLFRKLPFAGLHSHTIIYLSAKGHRPIDDNIDDEFKGTY 285


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,956
Number of Sequences: 438
Number of extensions: 3075
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)