Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322A09f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77133-5|CAO82039.1|  237|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z82086-4|CAB04998.1|  329|Caenorhabditis elegans Hypothetical pr...    28   4.7  

>Z77133-5|CAO82039.1|  237|Caenorhabditis elegans Hypothetical
           protein K03A11.6 protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 198 DCQLVFTDRMVGMAYGKPVQVGTTIE 121
           +C+  ++D    M YG  V VGTT+E
Sbjct: 40  NCENTYSDDACTMIYGSSVTVGTTVE 65


>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
           protein H08M01.2b protein.
          Length = 1341

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 62  ATTHIETRNLNLNCSVCCFASMVVPTCT 145
           A+  +E RNL++ C      S  VP CT
Sbjct: 275 ASLFVEQRNLHVKCCFSTLLSQAVPLCT 302


>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
           protein H08M01.2a protein.
          Length = 1320

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 62  ATTHIETRNLNLNCSVCCFASMVVPTCT 145
           A+  +E RNL++ C      S  VP CT
Sbjct: 275 ASLFVEQRNLHVKCCFSTLLSQAVPLCT 302


>Z82086-4|CAB04998.1|  329|Caenorhabditis elegans Hypothetical
           protein ZK228.7 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +2

Query: 71  HIETRNLNLNCSVCCFASMVVPTCTGFPYAIPTILSVNTSWQ 196
           H+ +  L++  S      + +P C+G+P  I  +L + TS Q
Sbjct: 56  HLVSATLDVFFSFLAAPVLTLPGCSGYPLGISLLLGIPTSIQ 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,246,786
Number of Sequences: 27780
Number of extensions: 277716
Number of successful extensions: 582
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)