Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322A07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67955-4|AAB07584.2| 211|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z81028-5|CAI91176.1| 224|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81028-4|CAB02692.2| 365|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z48717-4|CAA88607.1| 515|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 28 3.5
Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U67955-4|AAB07584.2| 211|Caenorhabditis elegans Hypothetical
protein C16H3.1 protein.
Length = 211
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 103 NYQKVSNTTLDNRYSFATTMTSERNAQVGQARETFQLIHQISQLLNTGLDVEALSTCIR 279
NY K++ TLD R + T+ E F ++ + Q++++ L L+T R
Sbjct: 103 NYSKIAKGTLDERLDWIFTLYDTNRCGFLAYNEIFHVVKSMYQMMDSSLKPAVLATICR 161
>Z81028-5|CAI91176.1| 224|Caenorhabditis elegans Hypothetical
protein B0365.5b protein.
Length = 224
Score = 29.1 bits (62), Expect = 2.0
Identities = 30/109 (27%), Positives = 49/109 (44%)
Frame = +1
Query: 82 SFKYVANNYQKVSNTTLDNRYSFATTMTSERNAQVGQARETFQLIHQISQLLNTGLDVEA 261
SF YV NN++KV + D + A T E + Q TF IH ++ D++
Sbjct: 40 SFSYVFNNFEKVCDLLEDGAFC-ARKCTQEDQTKFYQ-YTTFYRIH----CIDYEEDIQE 93
Query: 262 LSTCIRLCELGVDPEVLAHVIKEIRKMGENVQKASNLQT*IKPTIRNLQ 408
TCI + D ++ V K+ K V+K ++ +T +K L+
Sbjct: 94 HLTCI--AKAAEDADL---VCKDKCKQAHKVEKTASKETKMKKECLTLE 137
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = +1
Query: 274 IRLCELGVDPEVLAHVIKEIRKM--GENV--QKASNLQT*IKPT--IRNLQSRISKQTND 435
+ +C +PE LA +I+ IRK+ GENV +K + KPT N Q+ KQ
Sbjct: 85 VMVCISKANPEALAQLIEAIRKIVKGENVDIEKVKVKSSDFKPTTITVNNQATYKKQMQS 144
Query: 436 KNDF 447
++F
Sbjct: 145 CSEF 148
>Z81028-4|CAB02692.2| 365|Caenorhabditis elegans Hypothetical
protein B0365.5a protein.
Length = 365
Score = 28.7 bits (61), Expect = 2.7
Identities = 33/109 (30%), Positives = 48/109 (44%)
Frame = +1
Query: 82 SFKYVANNYQKVSNTTLDNRYSFATTMTSERNAQVGQARETFQLIHQISQLLNTGLDVEA 261
SF YV NN++KV + D + A T E + Q TF IH I G E
Sbjct: 180 SFSYVFNNFEKVCDLLEDGAFC-ARKCTQEDQTKFYQ-YTTFYRIHCID--YEEGYIQEH 235
Query: 262 LSTCIRLCELGVDPEVLAHVIKEIRKMGENVQKASNLQT*IKPTIRNLQ 408
L TCI + D ++ V K+ K V+K ++ +T +K L+
Sbjct: 236 L-TCI--AKAAEDADL---VCKDKCKQAHKVEKTASKETKMKKECLTLE 278
>Z48717-4|CAA88607.1| 515|Caenorhabditis elegans Hypothetical
protein T10B9.7 protein.
Length = 515
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 166 SERNAQVGQARETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEIRK 339
S+RN ++ + +++ Q L G D ALS L V+P++ VI+EI +
Sbjct: 298 SKRNLKITKELSADEVVGQCFLFLIGGFDTTALSLSYVTYLLAVNPKIQEKVIEEIAR 355
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Frame = +1
Query: 166 SERNAQVGQARETFQL--IHQISQL---LNTGLDVEALSTCIRLC----ELGVDPEVLAH 318
++RNA++ F+L +H+I L +NT ++ + TC LC EL PEV A
Sbjct: 1090 AKRNAELAAYFTHFELQPMHRILTLRSAINTFFKMKQMKTCASLCKRLLELAPKPEVAAQ 1149
Query: 319 VIK 327
+ K
Sbjct: 1150 IRK 1152
>Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical
protein F54D1.5 protein.
Length = 1406
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1
Query: 205 FQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEIRKMGENVQKASNLQT 378
F+L ++ +L G+ A +T + G+D V+ HV K + + G + + S + T
Sbjct: 210 FELEERLGRLFRKGMLKAAQTTGAWIITSGLDSGVVRHVAKALDEAGISARMRSQIVT 267
>Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical
protein F54G8.5 protein.
Length = 844
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -1
Query: 95 TYLNDYFFKLQEWINIFLTFIP-YKHTSSS 9
TY+ + + WI++FL+ IP YK T+S+
Sbjct: 215 TYILESSESTERWIDLFLSAIPRYKETNST 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,838,712
Number of Sequences: 27780
Number of extensions: 237223
Number of successful extensions: 654
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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