Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322A07f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          26   0.27 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   3.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   4.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.7  

>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = -1

Query: 71  KLQE-WINIFLTFIPYKHTSS 12
           KL+E WI++ ++F+P K TSS
Sbjct: 63  KLEENWIHVDISFLPEKSTSS 83


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 22/76 (28%), Positives = 34/76 (44%)
 Frame = -2

Query: 229 VISGGLIERFPALGLLERSSPMSW*LQNCSDCLV*CLILFGNCSLRI*MITFSNFRNGLT 50
           V+S G  E  PA  + E++   SW        +V CL LFGN  + + ++     +    
Sbjct: 167 VVSAG--ECGPAADVDEKTDANSWWALIL--VIVPCLTLFGNVLVILAVVRERALQTVTN 222

Query: 49  YF*RSFHTNILLVLII 2
           YF  S     LLV ++
Sbjct: 223 YFIVSLAVADLLVAVL 238


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 171 EERSSRPSAGNLSINPPDITTP 236
           EE S+RPS       P + TTP
Sbjct: 46  EELSARPSFKTFDKGPKNYTTP 67


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 419 PNKQMTRMIFKSILDLSYFNAPNISRYEIPQY 514
           P  +   M +K    LS  +  N   YEIP Y
Sbjct: 609 PRGKPEGMRYKMFFFLSSMDESNTKSYEIPLY 640


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 419 PNKQMTRMIFKSILDLSYFNAPNISRYEIPQY 514
           P  +   M +K    LS  +  N   YEIP Y
Sbjct: 609 PRGKPEGMRYKMFFFLSSMDESNTKSYEIPLY 640


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 283 CELGVDPEVLAHVIKEIRKMGENV 354
           C  G+D   + +   E R+MG  V
Sbjct: 189 CAFGIDMSSMTNENSEFRRMGREV 212


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 437 RMIFKSILDLSYFNAPNISRY 499
           R++ K  LD++    PN+ RY
Sbjct: 815 RILLKRFLDITTPPTPNLLRY 835


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,306
Number of Sequences: 438
Number of extensions: 3067
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)