Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322A04f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0840 + 28570642-28570809,28570919-28571025,28571137-285712... 193 6e-50
12_01_0489 + 3872495-3872538,3872663-3872741,3872835-3872914,387... 124 3e-29
02_05_0922 - 32742863-32742958,32743081-32743136,32743253-327433... 117 5e-27
03_06_0267 - 32751431-32751489,32751600-32751645,32751886-327519... 48 3e-06
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 48 5e-06
03_02_0466 - 8690469-8690522,8691008-8691113,8691216-8691457,869... 47 1e-05
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 46 2e-05
06_01_0400 + 2862684-2862872,2862956-2863170,2863298-2863448,286... 38 0.006
12_01_0671 - 5702051-5702159,5702493-5703216,5703910-5704476,570... 37 0.009
08_01_0139 + 1105857-1107008,1107124-1107328,1107583-1107768,110... 37 0.009
11_02_0042 - 7672565-7672729,7672902-7672977,7673409-7674132,767... 37 0.011
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642... 36 0.020
12_01_0668 - 5682664-5682916,5684542-5684576,5684643-5684693,568... 36 0.026
04_03_0687 + 18713603-18713962,18715318-18715539,18717068-187172... 35 0.046
05_06_0166 + 26093618-26095381,26095820-26096039,26096345-260966... 34 0.060
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 33 0.14
05_06_0104 - 25603568-25603867,25603965-25604162,25604247-256045... 33 0.18
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826... 33 0.18
03_02_0445 - 8551912-8552047,8552729-8552896,8553785-8554068,855... 32 0.24
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875... 32 0.24
03_04_0140 + 17638335-17638583,17638843-17639061,17639206-176394... 32 0.32
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 32 0.32
06_03_1497 + 30585074-30586327 31 0.42
10_08_1019 - 22299800-22299946,22300040-22300109,22300930-223010... 31 0.56
04_04_1553 - 34363848-34366058,34369087-34370451 31 0.56
03_05_0169 + 21474655-21474771,21474879-21474971,21475553-214756... 31 0.56
05_06_0196 + 26293889-26294122,26294317-26294375,26294454-262945... 31 0.74
04_03_0784 - 19610370-19611548,19611830-19611919,19612001-196120... 31 0.74
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 30 0.98
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 30 0.98
01_05_0749 + 24890944-24891146,24891414-24891535,24891633-248917... 30 0.98
01_05_0631 + 23835120-23836109,23836204-23836674 30 0.98
02_05_0693 - 30977323-30977421,30977783-30977843,30978874-309789... 30 1.3
02_02_0543 + 11360514-11361350,11361434-11361559,11361648-113619... 30 1.3
11_06_0346 - 22549699-22549721,22549857-22549999,22550100-225521... 29 1.7
09_06_0067 - 20645012-20645095,20645365-20645466,20645583-206458... 29 1.7
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 29 1.7
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 29 1.7
06_01_0042 + 410061-410544,411401-411837 29 1.7
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 29 1.7
11_03_0031 - 9094643-9095824,9095945-9096034,9096141-9096216,909... 29 2.3
08_02_0657 - 19749835-19751942,19753123-19753561 29 2.3
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 29 2.3
03_02_0741 - 10857656-10857844,10858315-10858848,10859516-108598... 29 2.3
02_04_0052 + 19271014-19271627,19272055-19272224,19272321-192725... 29 2.3
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019... 29 2.3
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 29 2.3
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 29 2.3
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 29 2.3
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 29 2.3
12_02_1267 - 27448871-27450445 29 3.0
05_01_0446 - 3551754-3551795,3551932-3552397,3552424-3552921,355... 29 3.0
04_04_0251 + 23930789-23930960,23931065-23931128,23931641-239317... 29 3.0
05_04_0102 + 18013994-18014049,18014236-18014335,18014499-180147... 28 4.0
04_04_0394 + 24905501-24905673,24907824-24907868,24908412-249085... 28 4.0
03_01_0618 + 4543013-4543111,4544100-4544177,4544739-4544873,454... 28 4.0
02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303 28 4.0
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709... 28 5.2
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 28 5.2
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 28 5.2
06_03_1258 + 28796643-28798169 28 5.2
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 28 5.2
06_01_0369 + 2651192-2651862,2652103-2652158,2652816-2652874,265... 28 5.2
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 28 5.2
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047... 28 5.2
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320... 28 5.2
02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-41... 28 5.2
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 28 5.2
09_04_0220 - 15813809-15815380 27 6.9
07_01_0665 + 5001599-5003149 27 6.9
06_03_1259 - 28800954-28802468 27 6.9
06_01_0065 + 549972-550770,551577-552190,552392-552544,552769-55... 27 6.9
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 27 6.9
04_04_0917 - 29404341-29404519,29404610-29404744,29404898-294052... 27 6.9
04_04_0193 + 23482177-23484963 27 6.9
03_01_0089 + 714803-715089,715941-716085,717171-717292,717660-71... 27 6.9
02_05_0459 + 29217728-29217919,29218095-29218190,29219785-292198... 27 6.9
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 27 6.9
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773... 27 9.1
11_06_0348 - 22561589-22563656,22563788-22564602 27 9.1
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150... 27 9.1
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 27 9.1
09_02_0383 - 8259156-8261843 27 9.1
07_01_0672 - 5041742-5043175 27 9.1
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936... 27 9.1
04_04_0919 - 29422003-29422267,29422411-29422660,29423163-294234... 27 9.1
03_06_0678 - 35480711-35484658 27 9.1
03_02_0901 + 12267042-12267182,12267949-12268095,12268163-122682... 27 9.1
01_05_0313 + 20751466-20751495,20752004-20752507 27 9.1
01_01_0479 - 3519778-3520306,3520517-3520716,3520974-3520976 27 9.1
>04_04_0840 +
28570642-28570809,28570919-28571025,28571137-28571238,
28571786-28571981,28572691-28572819,28572869-28572895,
28572896-28573090,28573182-28573292
Length = 344
Score = 193 bits (471), Expect = 6e-50
Identities = 90/131 (68%), Positives = 108/131 (82%)
Frame = +1
Query: 127 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 306
P + + ++PW+EKYRP D+ GN D V+RL A+ GN PN+I++GPPG GKTT+IL
Sbjct: 9 PDLADAYDIPWVEKYRPTRVADVGGNSDAVARLQDIARDGNMPNLILSGPPGTGKTTSIL 68
Query: 307 CLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMT 486
LA LLG S+++AVLELNAS+DRG+DVVRNKIKMFAQ+KVTL PGRHKIVILDEADSMT
Sbjct: 69 SLAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILDEADSMT 128
Query: 487 DGAQQALRRTM 519
GAQQALRRTM
Sbjct: 129 SGAQQALRRTM 139
>12_01_0489 +
3872495-3872538,3872663-3872741,3872835-3872914,
3873888-3874007,3874090-3874159,3874238-3874311,
3874393-3874513,3874600-3874662,3874748-3874807,
3875156-3875281,3875358-3875441,3875912-3876010
Length = 339
Score = 124 bits (300), Expect = 3e-29
Identities = 67/129 (51%), Positives = 84/129 (65%), Gaps = 7/129 (5%)
Frame = +1
Query: 154 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGV 333
PW+EKYRP+ D+ E+ V L +T + P+++ GPPG GKTTT L +A L G
Sbjct: 10 PWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALAIAYQLYGP 69
Query: 334 S-FKDAVLELNASNDRGIDVVRNKIKMFA------QQKVTLPPGRHKIVILDEADSMTDG 492
+K VLELNAS+DRGI+VVR KIK FA +K P +KI+ILDEADSMT+
Sbjct: 70 ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIILDEADSMTED 129
Query: 493 AQQALRRTM 519
AQ ALRRTM
Sbjct: 130 AQNALRRTM 138
>02_05_0922 -
32742863-32742958,32743081-32743136,32743253-32743382,
32743768-32743849,32744038-32744227,32744290-32744369,
32744769-32744985,32745740-32745923
Length = 344
Score = 117 bits (282), Expect = 5e-27
Identities = 59/123 (47%), Positives = 82/123 (66%), Gaps = 3/123 (2%)
Frame = +1
Query: 154 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGV 333
PW+EKYRPQ+ D+ + D V + P++++ GPPG GKT+TIL +AR L G
Sbjct: 39 PWVEKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGS 98
Query: 334 SFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRH---KIVILDEADSMTDGAQQA 504
+ + +LELNAS++RGIDVVR +I+ FA + +L G K+V+LDEAD+MT AQ A
Sbjct: 99 QYGNMILELNASDERGIDVVRQQIQDFASAR-SLSFGAKQSVKMVLLDEADAMTKDAQFA 157
Query: 505 LRR 513
LRR
Sbjct: 158 LRR 160
>03_06_0267 -
32751431-32751489,32751600-32751645,32751886-32751960,
32752045-32752114,32752288-32752386,32752505-32752641,
32753040-32753221,32753314-32753482,32753824-32753856,
32753958-32754068,32754184-32754295,32755592-32755727,
32756264-32756291
Length = 418
Score = 48.4 bits (110), Expect = 3e-06
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +1
Query: 157 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS 336
W++KYRP+T D + ++ L + P+++ GP G GK T ++ L + + G
Sbjct: 67 WVDKYRPKTLDKVTVHDQVAQNLKKLVAEQDCPHLLFYGPSGSGKKTLVMALIKQMFGAG 126
Query: 337 FKDAVLE 357
+E
Sbjct: 127 ADKVKME 133
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 48.0 bits (109), Expect = 5e-06
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 20/98 (20%)
Frame = +1
Query: 148 NLPWIEKYRPQTFDDIVGNEDTVSRLAVF--------------------AKTGNAPNIII 267
+L W EKYRP+ +DIVGN+ V +L + A +G +++
Sbjct: 396 SLQWTEKYRPKVPNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGKGKKQADSGAKKAVLL 455
Query: 268 AGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRG 381
+GPPG+GKTTT +++ +LG+ +E+NAS+ RG
Sbjct: 456 SGPPGIGKTTTAKVVSQ-MLGLQ----AIEVNASDSRG 488
>03_02_0466 -
8690469-8690522,8691008-8691113,8691216-8691457,
8691477-8691546,8692224-8692499,8693058-8693137,
8693408-8693489,8693566-8693663,8693868-8693936,
8694015-8694113,8694681-8694737,8694874-8695039,
8695152-8695196,8695286-8695347,8695425-8695532,
8695719-8695769,8695843-8695944,8696362-8696448,
8696560-8696823,8696977-8697189,8697337-8697398,
8697517-8697849,8697943-8698138
Length = 973
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +1
Query: 202 NEDTVSRLAVFAKTGNAPN---IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASN 372
+ED S T NAP +++ GPPG+GKTT + +A G V+E+NAS+
Sbjct: 336 SEDLTSSFNKRPTTDNAPEQKVLLLCGPPGLGKTT-LAHVAAKHCGYH----VVEINASD 390
Query: 373 DRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEAD-SMTDG 492
DR + KI Q + + K +++DE D ++ DG
Sbjct: 391 DRSASSIEPKILDVIQMNSIMSDSKPKCLVIDEIDGALGDG 431
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 127 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAK 240
P + T W+EKY P +F +++ +E T + ++ K
Sbjct: 237 PVTPLVTEQLWVEKYSPNSFTELLSDEHTNREVLLWLK 274
>02_05_0449 -
29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +1
Query: 139 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAR 318
++ L W +KYRP+T + + + +L T P+II GPPG GK++ L R
Sbjct: 680 ENIRLFWADKYRPRTLGGFTCHREQIEQLKQLVSTEFCPHIIFKGPPGSGKSS----LCR 735
Query: 319 ALLGVSFKDAVLELN 363
A++ F D+ L ++
Sbjct: 736 AVVTEIFGDSSLNVS 750
>06_01_0400 +
2862684-2862872,2862956-2863170,2863298-2863448,
2863566-2863757,2864471-2864633,2864754-2864989,
2865446-2865622,2865707-2865826,2865939-2866241
Length = 581
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 256 NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGID 387
++++ GPPGVGKTT I +AR +L ++ V+ ++ SN+ G D
Sbjct: 119 SLLLIGPPGVGKTTVIREIAR-MLADDYRKRVMIVDTSNEIGGD 161
>12_01_0671 -
5702051-5702159,5702493-5703216,5703910-5704476,
5704654-5704873,5705303-5707207
Length = 1174
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 163 EKYRPQTFDDIVGNEDTVSRLA-VFAKTGNAPNIIIAGPPGVGKTTT 300
+KYRP+ F +IVG L+ + AP + GP G GKT+T
Sbjct: 404 QKYRPKLFSEIVGQHIVAQSLSNAITREKIAPAYLFQGPRGTGKTST 450
>08_01_0139 +
1105857-1107008,1107124-1107328,1107583-1107768,
1107924-1108133,1108552-1109186
Length = 795
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 160 IEKYRPQTFDDIVGNEDTVSRLAVFAKTGN-APNIIIAGPPGVGKTTTILCLARAL 324
++KYRP+ F ++ G L+ G AP + GP G+GKT+ A +L
Sbjct: 152 LQKYRPKAFSELAGQNVVAQSLSSAVLKGKLAPIYLFHGPHGIGKTSAARIFAASL 207
>11_02_0042 -
7672565-7672729,7672902-7672977,7673409-7674132,
7674684-7674708,7675041-7675486,7676643-7676862,
7677609-7678459,7678697-7679555
Length = 1121
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 163 EKYRPQTFDDIVGNEDTVSRL-AVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 324
+KYRP++F+++VG V L + AP + GP G GKT+ + AL
Sbjct: 339 QKYRPRSFNELVGQSFVVQSLNNAIIRERIAPAYLFHGPRGTGKTSAARIFSAAL 393
>02_02_0522 -
11161385-11161537,11162513-11162668,11164176-11164298,
11164404-11164466,11164512-11164577,11165128-11165232,
11165336-11165435,11165520-11165590,11166037-11166093,
11167215-11167292,11167367-11167441,11168490-11168540,
11169015-11169094,11169560-11169660,11169749-11169810,
11170084-11170590
Length = 615
Score = 35.9 bits (79), Expect = 0.020
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 NIIIAGPPGVGKTTTILCLARALLGVSFKDA-VLELNASNDRGIDVVRNKIKMFAQQKVT 432
NI++ GP G GKT LAR + V F A L + G DV K+ A
Sbjct: 214 NILVMGPTGSGKTLLAKTLAR-FVNVPFVIADATTLTQAGYVGEDVESILYKLLAAADFD 272
Query: 433 LPPGRHKIVILDEADSMTDGAQ 498
+ + IV +DE D +T A+
Sbjct: 273 VAAAQQGIVYIDEVDKITKKAE 294
>12_01_0668 -
5682664-5682916,5684542-5684576,5684643-5684693,
5685362-5685505,5685981-5686265,5686369-5686441,
5687123-5687343,5687447-5687524,5687626-5687688,
5688700-5688900
Length = 467
Score = 35.5 bits (78), Expect = 0.026
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 256 NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRG--IDVVRNKIKMFAQQKV 429
+I+ G PGVGKTT + +AR +L F+ V+ ++ SN+ G D+ I + +V
Sbjct: 182 SILFLGRPGVGKTTVMREIAR-VLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQV 240
Query: 430 TLPPGRHKIVI 462
P +H+++I
Sbjct: 241 AQPSMQHRVMI 251
>04_03_0687 +
18713603-18713962,18715318-18715539,18717068-18717256,
18717419-18717612,18718193-18718328
Length = 366
Score = 34.7 bits (76), Expect = 0.046
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +1
Query: 157 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS 336
W ++ + +D + + D S L+ +T +I GP GVGK++ I L R+ +S
Sbjct: 125 WRDRMKSWGYDPLFLSVDQKSGLSALEETLEGQTTVIVGPSGVGKSSLINAL-RSNQNIS 183
Query: 337 FKDAVLELNASNDR 378
+D + +L N +
Sbjct: 184 EEDPIHKLVEQNSK 197
>05_06_0166 +
26093618-26095381,26095820-26096039,26096345-26096674,
26097481-26098029,26098366-26098426,26099737-26099824,
26100240-26100299
Length = 1023
Score = 34.3 bits (75), Expect = 0.060
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 163 EKYRPQTFDDIVGNEDTVSRLA-VFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 324
+KY P+TF D++G V L+ K + GP G GKT+ A+AL
Sbjct: 358 QKYSPKTFKDMIGQSLVVQALSNAILKRKIGLVYVFYGPHGTGKTSCARVFAKAL 412
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 253 PNIIIAGPPGVGKTTTILCLARAL 324
PN+++ G PG GKTTT LA A+
Sbjct: 13 PNVLVTGTPGTGKTTTCSLLADAV 36
>05_06_0104 -
25603568-25603867,25603965-25604162,25604247-25604526,
25604615-25605419,25605518-25606673
Length = 912
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 187 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL 327
D ++G ++ + R+ N ++ G PGVGKT + LA+ ++
Sbjct: 181 DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIV 227
>02_04_0114 +
19879468-19880671,19882007-19882179,19882265-19882605,
19882698-19882977,19883070-19883267,19883380-19883652
Length = 822
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 187 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAR 318
D ++G +D V R+ + ++ G PGVGKT LAR
Sbjct: 196 DPVIGRDDEVDRVVCILCRRTKNSAVLVGAPGVGKTAIAEGLAR 239
>03_02_0445 -
8551912-8552047,8552729-8552896,8553785-8554068,
8554143-8555386,8556901-8556967,8557059-8557150,
8557269-8557480,8558541-8558623,8559092-8559122,
8559770-8559951,8560557-8560616,8561092-8561289,
8561485-8561539,8562740-8562855,8563012-8563176,
8563310-8563483,8564134-8564333,8564778-8564882,
8565063-8565126,8566452-8566718
Length = 1300
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 109 EKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAK 240
E +V P ++ NL W +KYRP+T + GN V L + K
Sbjct: 356 ELPEVTPKGCQTANL-WTDKYRPETAAQVCGNSKHVKFLNEWLK 398
>01_06_0595 -
30485460-30486097,30486721-30487179,30487339-30487558,
30488229-30489980
Length = 1022
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 163 EKYRPQTFDDIVGNEDTVSRLA-VFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 324
+K+ P+TF D+VG V L+ + + GP G GKT+ A+AL
Sbjct: 354 QKFAPKTFKDVVGQSLVVQALSNAVLRRKIGLVYVFYGPHGTGKTSCARVFAKAL 408
>03_04_0140 +
17638335-17638583,17638843-17639061,17639206-17639443,
17640614-17640809,17640888-17640942,17641495-17641645,
17642501-17642809,17642950-17643215,17643311-17644237,
17644386-17644712
Length = 978
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 172 RPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL 327
R D ++G +D + R N ++ G PGVGKT LA+ ++
Sbjct: 256 RQGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIV 307
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 163 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL 327
E R D ++G +D V R N +I G PGVGKT LA+ ++
Sbjct: 324 ELARRGKLDPVIGRDDEVRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGLAQRIV 378
>06_03_1497 + 30585074-30586327
Length = 417
Score = 31.5 bits (68), Expect = 0.42
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +1
Query: 259 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 438
I+I+GP G GKT L LA+ L G + + + RG+DV K + + +P
Sbjct: 28 IVISGPTGAGKTRLALDLAKRLSG----EIISADSVQVYRGLDV--GSAKPSSSDRAAVP 81
Query: 439 PGRHKIVILDEADSMTDG 492
H I IL +D + G
Sbjct: 82 --HHLIDILHASDDYSAG 97
>10_08_1019 -
22299800-22299946,22300040-22300109,22300930-22301066,
22301142-22301195,22301638-22301694,22301814-22301846,
22301942-22302067,22302162-22302815,22303042-22303166,
22303770-22303935
Length = 522
Score = 31.1 bits (67), Expect = 0.56
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +1
Query: 157 WIEKYRPQTFDDIVGNEDTVSRL-------AVFAKTGNAPNIIIAGPPGVGKTTTILCL 312
W +KYRP +D + N+D L V A+ N +II GP VGK + + L
Sbjct: 290 WADKYRPNFLNDFICNKDAALELYNQGFTPQVTAQECN--HIIFEGPTSVGKRSMVSAL 346
>04_04_1553 - 34363848-34366058,34369087-34370451
Length = 1191
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 326 RRARAKHSIVVVFPTPGGPAIIMLGALPVLAKTAKRDTV 210
RRARA H+++VV TP PA+ A +L+ A+ V
Sbjct: 32 RRARAVHALLVVSSTPSSPALTTFLANQLLSLYARLSAV 70
>03_05_0169 +
21474655-21474771,21474879-21474971,21475553-21475642,
21475728-21475811,21476088-21476252,21476995-21477182,
21477363-21477435,21477766-21477819,21478019-21478276,
21478891-21479097,21479293-21479396,21479809-21479953,
21480108-21480242,21480610-21480783
Length = 628
Score = 31.1 bits (67), Expect = 0.56
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 438
++ GPPG GKTTTI+ + L V +L ASN +D + ++ + + V L
Sbjct: 198 LLHGPPGTGKTTTIIEI--ILQEVKRGSKILACAASN-IAVDNIVERLSRYRTKLVRLGH 254
Query: 439 PGRHKIVILDEA 474
P R +LD A
Sbjct: 255 PARLLPQVLDSA 266
>05_06_0196 +
26293889-26294122,26294317-26294375,26294454-26294554,
26294638-26294717,26294856-26294906,26295225-26295299,
26295386-26295463,26295700-26295756,26296226-26296296,
26296395-26296494,26296574-26296678,26296763-26296825,
26296940-26297062,26297129-26297193,26297352-26297358
Length = 422
Score = 30.7 bits (66), Expect = 0.74
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 NIIIAGPPGVGKTTTILCLARALLGVSFKDA-VLELNASNDRGIDVVRNKIKMFAQQKVT 432
NI++ GP G GKT LAR V F A + + G DV + A K
Sbjct: 122 NILLIGPTGSGKTLLAKTLAR-FADVPFVIADATAITQAGYSGEDVESIICNLLAAAKFN 180
Query: 433 LPPGRHKIVILDEADSM 483
+ IV +DE D +
Sbjct: 181 VEATERGIVYIDEVDKL 197
>04_03_0784 -
19610370-19611548,19611830-19611919,19612001-19612076,
19612917-19613134,19613333-19613548,19613974-19614159,
19614242-19614364,19614456-19614571,19615126-19615588
Length = 888
Score = 30.7 bits (66), Expect = 0.74
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 187 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 324
D +VG +D + R+ N + G PGVGKT LA+ +
Sbjct: 238 DPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 283
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 241 TGNAPNIIIAGPPGVGKTTTILCLARAL 324
T I ++GPPGVGKT+ +ARAL
Sbjct: 458 TSQGKIICLSGPPGVGKTSIGRSIARAL 485
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 30.3 bits (65), Expect = 0.98
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +1
Query: 259 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 438
I++ GPPG GKT +A G SF + + S G D +N +F+ P
Sbjct: 538 ILLFGPPGTGKTMLAKAIAND-AGASFINVSMSTITSKWFGED-EKNVRALFSLAAKVAP 595
Query: 439 PGRHKIVILDEADSM 483
I+ +DE DSM
Sbjct: 596 ----TIIFVDEVDSM 606
>01_05_0749 +
24890944-24891146,24891414-24891535,24891633-24891721,
24891813-24891848,24892268-24892367,24892524-24892566,
24892645-24892739,24892978-24893036,24893114-24893613,
24893691-24893772,24893864-24894429,24894520-24894655,
24894750-24894812,24894942-24895172,24895282-24895395
Length = 812
Score = 30.3 bits (65), Expect = 0.98
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +1
Query: 259 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 438
+++ GPPG GKT LA A G SF + + + + + I+ L
Sbjct: 506 VLLFGPPGTGKTMLAKALANA-AGASFLN--ISMASMTSKWYGESEKCIQALFSLAAKLA 562
Query: 439 PGRHKIVILDEADSM 483
P I+ +DE DSM
Sbjct: 563 PA---IIFIDEVDSM 574
>01_05_0631 + 23835120-23836109,23836204-23836674
Length = 486
Score = 30.3 bits (65), Expect = 0.98
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +1
Query: 136 SKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNA--PNIIIAGPPGVGKTTTILC 309
S T L K + DD+ E + R + K G A ++ GPPG GK++ I
Sbjct: 209 STFTTLAMDHKQKQSVMDDL---ERFIKRKEYYKKIGKAWKRGYLLYGPPGTGKSSLIAA 265
Query: 310 LARAL 324
+A L
Sbjct: 266 MANYL 270
>02_05_0693 -
30977323-30977421,30977783-30977843,30978874-30978996,
30979258-30979340,30979847-30979924,30980375-30980506,
30980685-30980728,30980966-30981090,30981468-30981769,
30981877-30981994,30982444-30982574,30983082-30983276,
30983362-30983646
Length = 591
Score = 29.9 bits (64), Expect = 1.3
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 208 DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGI 384
D ++R N P ++ GPPG GKT++ +A+ GV LE+ S G
Sbjct: 361 DEIARATRCKFETNRPRAVLFEGPPGTGKTSSARVIAKQ-AGVPLLYVPLEIIMSKYYG- 418
Query: 385 DVVRNKIKMFAQQKVTLPPGRHKIVILDEADS 480
+ R +F+ LP G I+ LDE DS
Sbjct: 419 ESERLLGSVFSLAN-DLPDG--GIIFLDEVDS 447
>02_02_0543 +
11360514-11361350,11361434-11361559,11361648-11361976,
11362078-11362861
Length = 691
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +1
Query: 187 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL-----GVSFKDAV 351
D +VG E+ + R+ + + ++ G GVGKT LA+ + GV V
Sbjct: 70 DPVVGREEEIDRVVCILSRKSKNSAVLVGAAGVGKTAIAEGLAQRIARGEVSGVLEGARV 129
Query: 352 LELNAS 369
+ELN +
Sbjct: 130 VELNVA 135
>11_06_0346 -
22549699-22549721,22549857-22549999,22550100-22552175,
22552305-22552822
Length = 919
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 187 DDIVGNEDTVSRLA--VFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 324
D +VG + T + L + A + + IAGP G+GKTT + L R L
Sbjct: 55 DHLVGIDGTANELLGWLMAADKSLRVMAIAGPAGIGKTTLAMELHRRL 102
>09_06_0067 -
20645012-20645095,20645365-20645466,20645583-20645828,
20646042-20646236,20646343-20646636,20646952-20647134,
20647534-20647593,20647796-20648002,20648081-20648282,
20648367-20648494,20648759-20648842,20648955-20649134,
20649281-20649372,20649620-20649789,20650226-20650337,
20650451-20650554,20651262-20651371
Length = 850
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 253 PNIIIAGPPGVGKTTTILCLARAL 324
P + GPPGVGKT+ +A+AL
Sbjct: 402 PVLCFVGPPGVGKTSLASSIAKAL 425
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLA 315
++ GPPG GKTT +L LA
Sbjct: 78 LLLGPPGAGKTTLLLALA 95
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 256 NIIIAGPPGVGKTTTI 303
+I++ GPPGVGKTT I
Sbjct: 202 SILVIGPPGVGKTTLI 217
>06_01_0042 + 410061-410544,411401-411837
Length = 306
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 241 TGNAPNIII--AGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVV 393
+G P +++ +G GVGKTTT LA +L +S ++ +A R +D++
Sbjct: 32 SGPTPRVVVVTSGKGGVGKTTTTANLAASLARLSLSAVAVDADAGL-RNLDLL 83
>02_04_0067 -
19425019-19425288,19425393-19425647,19425766-19425937,
19426069-19426302,19426523-19426656,19427663-19427746,
19428355-19428645,19428788-19429120,19429317-19429390,
19429464-19429644,19429993-19430096,19430232-19430392,
19430727-19431040,19431583-19431864,19432431-19432732,
19433176-19433266,19433368-19433421,19438917-19438993,
19439081-19439240,19439410-19439494,19439574-19440130
Length = 1404
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARAL 324
++ GPPG GKTT +L LA L
Sbjct: 189 LLLGPPGCGKTTLLLALAGKL 209
>11_03_0031 -
9094643-9095824,9095945-9096034,9096141-9096216,
9096759-9096976,9097283-9097512,9097617-9097683,
9097863-9098048,9098164-9098295,9098380-9098492,
9098771-9098777
Length = 766
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 187 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 324
D +VG ++ V R+ N + G PGVGKT LA+ +
Sbjct: 88 DPVVGRQNQVDRVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 133
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +1
Query: 259 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGI--DVVRNKIKMFAQQKVT 432
I++ GPPG GKT LARA+ S V+ G+ + N +FA+
Sbjct: 252 ILLYGPPGTGKT----LLARAIAAESGAHFVVVNGPEIMSGMPGESEANLRAVFAEADAA 307
Query: 433 LPPGRHKIVILDEADSMTDGAQQA 504
P IV +DE DS+ ++A
Sbjct: 308 AP----SIVFMDEIDSIAPSREKA 327
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARAL 324
++ GPPG GKTT +L LA L
Sbjct: 232 LLLGPPGSGKTTLLLALAGKL 252
>03_02_0741 -
10857656-10857844,10858315-10858848,10859516-10859824,
10860521-10860622,10861446-10861613,10862734-10862847,
10863003-10863107,10863206-10863336,10863680-10863804,
10863890-10864061,10864411-10864505,10864771-10864841,
10864923-10865009,10865119-10865184,10865401-10865499,
10866631-10866672,10866757-10866822,10866910-10867101,
10867224-10867289,10868473-10868811
Length = 1023
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 259 IIIAGPPGVGKTTTILCLARAL 324
I + GPPGVGKT+ +ARAL
Sbjct: 477 ICLCGPPGVGKTSIGRSVARAL 498
>02_04_0052 +
19271014-19271627,19272055-19272224,19272321-19272550,
19272657-19272765,19272858-19272985,19273102-19273203,
19273285-19273566,19273660-19273769,19273851-19274145,
19274242-19274475,19274705-19274935,19275167-19275478
Length = 938
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +1
Query: 187 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNA 366
D I+G E+ + R+ N I+ G GVGKT LA L ++ D + L A
Sbjct: 283 DPIIGREEEIERVVQIICRRTKNNPILLGEAGVGKTAIAEGLA---LRIANGDVPIYLVA 339
Query: 367 SNDRGIDV 390
+DV
Sbjct: 340 KRIMSLDV 347
>02_03_0314 -
17600970-17600974,17601230-17601357,17601832-17601924,
17602145-17602257,17602520-17602627,17602724-17602828,
17603185-17603355,17603474-17603652,17603741-17603969,
17604841-17604955,17605137-17605312,17606060-17606143,
17606463-17606630,17607011-17607097,17607201-17607323
Length = 627
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 253 PNIIIAGPPGVGKTTTILCLARALLG 330
P +I GP G GKTT I CL + G
Sbjct: 28 PLTLIVGPNGAGKTTIIECLKLSCTG 53
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARAL 324
++ GPPG GKTT +L LA L
Sbjct: 181 LLLGPPGSGKTTLLLALAGKL 201
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARAL 324
++ GPPG GKTT +L LA L
Sbjct: 194 LLLGPPGSGKTTLLLALAGRL 214
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARAL 324
++ GPPG GKTT +L LA L
Sbjct: 203 LLLGPPGSGKTTLLLALAGRL 223
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARAL 324
++ GPPG GKTT +L LA L
Sbjct: 233 LLLGPPGSGKTTLLLALAGKL 253
>12_02_1267 - 27448871-27450445
Length = 524
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 232 FAKTGNA--PNIIIAGPPGVGKTTTILCLARAL 324
+AK G A ++ GPPG GK+T I +A L
Sbjct: 236 YAKVGKAWKRGYLLHGPPGTGKSTMIAAMANFL 268
>05_01_0446 -
3551754-3551795,3551932-3552397,3552424-3552921,
3553288-3553334
Length = 350
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -1
Query: 317 RAKHSIVVVFPTPGGPA--IIMLGALPVLAKTAKRDTVSSLPTISSKVCGLYFSIHGKFV 144
R +H + + P P +++LG P +++A TVS + +C ++ G +
Sbjct: 239 RFEHPPIPIAPRPPRTMEEVVLLGWPPQRSESASTGTVSFIGRTYDMICTEDSNVKGYTM 298
Query: 143 DLLELGFTC 117
L+E G C
Sbjct: 299 KLMESGLVC 307
>04_04_0251 +
23930789-23930960,23931065-23931128,23931641-23931747,
23931832-23931899,23932068-23932097,23932357-23932460,
23932558-23932662,23932815-23932904,23932982-23933057,
23933292-23933361,23933799-23933869,23933945-23934035,
23934192-23934319,23934547-23934675,23934762-23934902
Length = 481
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 IIIAGPPGVGKTTTILCLARALLGVSFKD-----AVLELNASN--DRGIDVVRNKI-KMF 414
+++ GPPG GKT+ LA+ L + FK ++E+NA + + + K+F
Sbjct: 219 VLLHGPPGTGKTSLCKALAQK-LSIRFKSRYSMCQLIEVNAHSLFSKWFSESGKLVAKLF 277
Query: 415 AQ-QKVTLPPGRHKIVILDEADSMTDGAQQAL 507
+ Q++ V++DE +S+ Q A+
Sbjct: 278 QKIQEMVEEESNLVFVLIDEVESLAAARQAAI 309
>05_04_0102 +
18013994-18014049,18014236-18014335,18014499-18014783,
18014854-18015023,18015382-18015510,18016109-18016205,
18016318-18016395,18016474-18016635,18016673-18016771
Length = 391
Score = 28.3 bits (60), Expect = 4.0
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 214 VSRLAVFAKTGNAP--NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASN-DRGI 384
+ A F + G +P +++ GPPG KTT A A F + EL + G
Sbjct: 158 IKHAASFDRLGISPIRGVLLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSKYVGEGE 217
Query: 385 DVVRNKIKMFAQQKVTLPPGRHKIVILDEADSM 483
++R + F ++ P I+ DEAD++
Sbjct: 218 ALLR---RTFQMARLASP----SIIFFDEADAI 243
>04_04_0394 +
24905501-24905673,24907824-24907868,24908412-24908513,
24908700-24908799,24908963-24909247,24909318-24909487,
24909846-24909974,24910332-24910428,24910541-24910618,
24910694-24911017
Length = 500
Score = 28.3 bits (60), Expect = 4.0
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 214 VSRLAVFAKTGNAP--NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASN-DRGI 384
+ A F + G +P +++ GPPG KTT A A F + EL + G
Sbjct: 246 IKHAASFDRLGISPIRGVLLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSKYVGEGE 305
Query: 385 DVVRNKIKMFAQQKVTLPPGRHKIVILDEADSM 483
++R + F ++ P I+ DEAD++
Sbjct: 306 ALLR---RTFQMARLASP----SIIFFDEADAI 331
>03_01_0618 +
4543013-4543111,4544100-4544177,4544739-4544873,
4544971-4545078,4545397-4545525,4546191-4546306,
4546392-4546509,4547274-4547379,4547492-4547631,
4547735-4547905,4547984-4548094,4548206-4548317,
4548615-4548943,4549064-4549154,4549542-4549637,
4549710-4549780,4549868-4549980,4550353-4550434
Length = 734
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = -2
Query: 478 CPLHLV----SLFYVDQVAK*PFVAQTFLSYSGRHLY 380
CP+HL S ++ VA P + LSYSG H+Y
Sbjct: 254 CPMHLADTRKSNLHLTHVAFSPNGKEVLLSYSGEHVY 290
>02_05_0330 - 27996080-27996757,27996836-27997366,27998124-27998303
Length = 462
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARALL 327
+I GPPG GKT TI L A+L
Sbjct: 289 LIWGPPGTGKTKTISTLLWAML 310
>12_01_0777 -
7095081-7096259,7096636-7096725,7096827-7096902,
7097150-7097367,7097502-7097717,7097922-7098107,
7098181-7098303,7098399-7098514,7099254-7099832,
7101485-7101517,7102485-7103679,7103732-7103797,
7104843-7104905,7105328-7105411
Length = 1407
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 187 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 324
D +VG + + R+ N + G PGVGKT LA+ +
Sbjct: 757 DPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI 802
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 211 TVSRLAVFAKTGNAP--NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNAS 369
++ R V K N P + I AGP GVGK+ LA G ++A++ L+ S
Sbjct: 1106 SIRRARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFG--SEEAMIRLDMS 1158
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 241 TGNA-PNIIIA--GPPGVGKTTTILCLARALLGVSFKDAVLELN 363
TG+A P I A GP G GK+T + LA L +F D + LN
Sbjct: 95 TGHAEPGTITALMGPSGSGKSTLLDALAGRLAANAFLDGTVLLN 138
>09_02_0569 -
10752756-10753164,10753229-10753644,10754149-10755349,
10756770-10756991,10757615-10757767,10757883-10758034,
10758142-10758222,10758353-10758598,10759394-10759516
Length = 1000
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 112 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 291
KK+ + ++LP + + P IVG ++ ++ K G I I G G GK
Sbjct: 430 KKRAPENDGMFSSLPLVGREMPLP-PYIVGQDEYKDKIVGSIKQGTTGTIGICGMGGSGK 488
Query: 292 TTTI 303
TT +
Sbjct: 489 TTLL 492
>06_03_1258 + 28796643-28798169
Length = 508
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 232 FAKTGNA--PNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASN 372
+A+ G A ++ GPPG GKT+ + +A LL D L SN
Sbjct: 256 YARAGRAWKRGYLLHGPPGTGKTSLVAAIAN-LLEFDIYDLELTTVTSN 303
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 334 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 501
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 270 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 326
>06_01_0369 +
2651192-2651862,2652103-2652158,2652816-2652874,
2653094-2653165,2653356-2653439,2654522-2654629,
2655543-2655605,2655733-2655813,2656316-2656421,
2657111-2657244,2657753-2657830,2658462-2658500,
2658673-2658755,2659228-2659300,2659842-2660012
Length = 625
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +1
Query: 259 IIIAGPPGVGKTTTILCLARAL---LGVSFKDAVLELNASNDRGIDVVRNK 402
I++ G PGVGK++ IL LA + +G A++ + S + I+ + N+
Sbjct: 246 ILVGGDPGVGKSSLILQLASIMSENIGAGESSAIVYV--SGEESIEQIGNR 294
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = -1
Query: 233 KTAKRDTVSSLPTISSKVCGLYFSIHGKFVDLLELGFTCF 114
++ + +TV+ + + +VC + +HG+ + L +G CF
Sbjct: 258 RSRREETVALIRNVGMEVCEAFMGLHGEGLVLGCIGLGCF 297
>04_03_0826 +
20103105-20103697,20104222-20104391,20104487-20104716,
20104825-20104933,20104967-20105154,20105818-20105919,
20106114-20106395,20106504-20106625,20106708-20107020,
20107096-20107329,20107477-20107767,20107975-20108286
Length = 981
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 187 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 324
D ++G +D + R+ N I+ G GVGKT LA +
Sbjct: 276 DPVIGRKDEIERVVQIICRRTKNNPILLGEAGVGKTAIAEGLAHKI 321
>03_01_0417 -
3197956-3198438,3198550-3200001,3200116-3200277,
3200351-3201133
Length = 959
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 196 VGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASN 372
+ E + + G AP +I GPPG GKT T++ L + VL ASN
Sbjct: 395 INTEQADAVATILGCRGVAPYVIY-GPPGTGKTMTLVESILQLYTAKRRANVLICAASN 452
>02_01_0055 +
410661-411380,411481-413733,414486-414875,414983-418153
Length = 2177
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 256 NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLE 357
NI++ P G GKT + +G+ KD V +
Sbjct: 535 NILLCAPTGAGKTNVAVLTILQQIGLHMKDGVFD 568
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 334 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 501
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 240 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 296
>09_04_0220 - 15813809-15815380
Length = 523
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 226 AVFAKTGNA--PNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASN 372
A + +TG A ++ GPPG GK++ I +A LG D L SN
Sbjct: 228 AFYERTGRAWKRGYLLYGPPGTGKSSMIAAMANH-LGYDVYDLELTEVGSN 277
>07_01_0665 + 5001599-5003149
Length = 516
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 232 FAKTGNA--PNIIIAGPPGVGKTTTILCLARAL 324
+A+ G A ++ GPPG GK+T I +A L
Sbjct: 257 YARVGRAWKRGYLLHGPPGTGKSTMIAAMANYL 289
>06_03_1259 - 28800954-28802468
Length = 504
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 232 FAKTGNA--PNIIIAGPPGVGKTTTILCLARAL 324
+A+ G A ++ GPPG GKT+ + +A L
Sbjct: 247 YARVGRAWKRGYLLHGPPGTGKTSLVAAIANLL 279
>06_01_0065 +
549972-550770,551577-552190,552392-552544,552769-552885,
552972-553076,553269-553334,553430-553494,553577-553778,
554026-554169,554212-554340
Length = 797
Score = 27.5 bits (58), Expect = 6.9
Identities = 26/87 (29%), Positives = 38/87 (43%)
Frame = +1
Query: 259 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 438
+++ GPPG GKTT +A GV F S G N +F + T P
Sbjct: 228 LLLHGPPGCGKTTLAHAIANE-TGVPFYKISAPEVVSGVSGAS-EENIRSLFKKAYRTAP 285
Query: 439 PGRHKIVILDEADSMTDGAQQALRRTM 519
IV +DE D++ ++ L+R M
Sbjct: 286 ----SIVFIDEIDAIA-SKRENLQREM 307
>04_04_1035 +
30283456-30283536,30284823-30285359,30285508-30286512,
30286718-30287042,30287563-30287818,30287901-30288117,
30288743-30289095,30289330-30289833,30291267-30292467,
30292614-30292970,30293258-30293495,30294083-30295125,
30295234-30296649,30296731-30296855,30297036-30297314,
30297352-30297382,30298957-30299022,30299447-30299689,
30299848-30299898,30299980-30300071,30300182-30300249,
30300515-30300600,30300720-30300824,30300994-30301127,
30302403-30302436,30302620-30302892,30303019-30303288,
30303384-30303974,30304065-30304214
Length = 3376
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARAL 324
+I GPPG GKT T+ L AL
Sbjct: 248 LIWGPPGTGKTKTVSALLWAL 268
>04_04_0917 -
29404341-29404519,29404610-29404744,29404898-29405225,
29405313-29405532,29405653-29406647,29407233-29407493,
29407534-29407872,29409309-29409497
Length = 881
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARALL 327
+I GPPG GKT TI + A+L
Sbjct: 315 LIWGPPGTGKTKTISTILWAML 336
>04_04_0193 + 23482177-23484963
Length = 928
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 196 VGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTI 303
+G + ++R+A + G I I G PGVGKTT +
Sbjct: 140 IGLDALLARVANAFQEGGTSVIGIYGAPGVGKTTLL 175
>03_01_0089 +
714803-715089,715941-716085,717171-717292,717660-717918
Length = 270
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVV 393
+I GP GKTT +L + G A+++ + N G+D V
Sbjct: 71 VIVGPMFAGKTTALLRRVQVEAGTGRNVALIKSDKDNRYGLDSV 114
>02_05_0459 +
29217728-29217919,29218095-29218190,29219785-29219895,
29219984-29220293,29220745-29220835,29220976-29221285,
29221469-29221617,29221914-29222418
Length = 587
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 214 VSRLAVFAKTGNAP--NIIIAGPPGVGKTTTILCLAR 318
++R K+ +AP N++ GPPG GKT +AR
Sbjct: 332 LARATANTKSHDAPFRNMLFYGPPGTGKTLVAREMAR 368
>02_02_0009 +
6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARAL 324
++ GPPG GKT+ +L LA L
Sbjct: 184 LLLGPPGSGKTSLLLALAGKL 204
>12_01_0833 -
7730761-7731030,7731171-7731425,7731565-7731736,
7731873-7732106,7732362-7732495,7734116-7734199,
7735086-7735376,7735566-7735898,7736351-7736424,
7736558-7736653,7736876-7737029,7737118-7737221,
7737325-7737485,7737774-7738087,7738950-7739231,
7739909-7740210,7740513-7740713,7740924-7741014,
7741424-7741500,7741595-7741754,7742026-7742110,
7742194-7742288
Length = 1322
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARAL 324
++ GPPG GKTT + LA L
Sbjct: 35 LLLGPPGCGKTTLLKALAGRL 55
>11_06_0348 - 22561589-22563656,22563788-22564602
Length = 960
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 187 DDIVGNEDTVSRLA--VFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 324
D +V + T + L + A + + IAGP G+GKTT + L R L
Sbjct: 156 DHLVAIDGTANELLGWLMAADESLRVMAIAGPAGIGKTTLAMELHRRL 203
>09_02_0504 -
10013784-10014041,10014558-10014660,10014932-10015093,
10015416-10015549,10015633-10015716,10015839-10016129,
10016362-10016694,10016823-10016965,10017273-10017429,
10017513-10017616,10017728-10017888,10017971-10018287,
10018396-10018677,10018759-10019226,10019338-10019391,
10019689-10019742,10019943-10020021,10020108-10020196,
10021153-10021273,10022321-10022637
Length = 1236
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLA 315
++ GPPG GKT+ +L LA
Sbjct: 179 LLLGPPGSGKTSLLLALA 196
>09_02_0501 -
9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARAL 324
++ GPPG GKT+ ++ LA L
Sbjct: 180 LLLGPPGSGKTSLLMALAGTL 200
>09_02_0383 - 8259156-8261843
Length = 895
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 166 KYRPQTFDDIVGNEDTVSRLAVFA--KTGNAPNIIIAGPPGVGKTTTILCLARALLG 330
++RP ++G E + + + K N P I I G GVGKTT + + LG
Sbjct: 148 EHRPIGTSVVIGMEHYLDMVMCYLREKDKNIPVIGIWGMGGVGKTTLLKLINNEFLG 204
>07_01_0672 - 5041742-5043175
Length = 477
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 232 FAKTGNA--PNIIIAGPPGVGKTTTILCLARAL 324
+A+ G A ++ GPPG GK+T I +A L
Sbjct: 236 YARIGKAWKRGYLLHGPPGTGKSTMIAAMANYL 268
>04_04_0959 + 29692740-29693035,29693102-29693267,29693433-29693612,
29693703-29693771,29693888-29694088,29694187-29694240,
29694325-29694386,29694488-29694620,29694789-29694899,
29695008-29695104,29695638-29695714,29696129-29696194,
29696431-29696583,29697392-29697447,29697524-29697584,
29697656-29697766,29698010-29698144,29698217-29698447,
29699001-29699075,29699161-29699282,29699381-29699453,
29699538-29699642,29699728-29699895,29700079-29700148,
29700224-29700375,29700574-29700651,29700744-29700836,
29700961-29701098,29701237-29701276,29701350-29701423,
29701777-29701911,29702345-29702464,29702778-29702939
Length = 1287
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +1
Query: 262 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPP 441
+I G PG GKT T++ ++LL + + L + + ID + K+K A+ L
Sbjct: 887 LILGMPGTGKTYTMVHAVKSLL---MRGESILLTSYTNSAIDNLLMKLK--AEGVDFLRI 941
Query: 442 GRHKIV 459
GRH+ V
Sbjct: 942 GRHEAV 947
>04_04_0919 -
29422003-29422267,29422411-29422660,29423163-29423481,
29423625-29424794,29424879-29425388,29425449-29425607
Length = 890
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 235 AKTGNAPNIIIAGPPGVGKTTTILCLARALL 327
A T + +I GPPG GKT TI L L+
Sbjct: 273 ASTTSGRFSLIWGPPGTGKTKTISVLLLMLM 303
>03_06_0678 - 35480711-35484658
Length = 1315
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 205 EDTVSRLAVFAKTGNAPNIIIAGPPGVGKTT 297
E+ V+RL A G+ I I G G+GKTT
Sbjct: 180 EEIVNRLLAQASNGDLTVIPIVGMGGMGKTT 210
>03_02_0901 +
12267042-12267182,12267949-12268095,12268163-12268253,
12268367-12268485,12268779-12268969,12269440-12269650,
12270072-12270309,12270944-12271329,12271933-12271956,
12271984-12272077,12272341-12272525,12273025-12273255,
12273665-12273730,12273816-12274034,12274764-12275003,
12275244-12275423,12276269-12276535,12276612-12276815,
12276896-12277048
Length = 1128
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 259 IIIAGPPGVGKTTTILCLAR 318
+++ GPP VGK+ I CL +
Sbjct: 89 VVVQGPPQVGKSLLIKCLVK 108
>01_05_0313 + 20751466-20751495,20752004-20752507
Length = 177
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 376 RGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEAD 477
+G+ VV K + + + +P G+ K V+LDE D
Sbjct: 121 KGVHVVDQKHSEYLKMQKPVPEGKTKKVLLDEND 154
>01_01_0479 - 3519778-3520306,3520517-3520716,3520974-3520976
Length = 243
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 133 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPG 282
S KS L W+ RP + + + + + L++ GN ++I A PG
Sbjct: 29 SGKSCRLRWMNYLRPDLKKEPISDREAETILSLQKLLGNRWSVIAAKMPG 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,786,101
Number of Sequences: 37544
Number of extensions: 213307
Number of successful extensions: 959
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -