Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322A02f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2645|AAF55653.1|  368|Drosophila melanogaster CG3773-PA...    30   1.7  
AY122266-1|AAM52778.1|  369|Drosophila melanogaster SD18375p pro...    29   5.1  
AY060450-1|AAL25489.1|  107|Drosophila melanogaster LP07955p pro...    28   8.8  
AE014297-1209|AAO41542.1|  107|Drosophila melanogaster CG4655-PB...    28   8.8  

>AE014297-2645|AAF55653.1|  368|Drosophila melanogaster CG3773-PA
           protein.
          Length = 368

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 347 SFVTAATWVNQDIEEFKSGTSKTSLEFA*H-ESSSKEASVVRILLSQIA 490
           SF+TA      DIEEFK  T       A H ++SS  A +V I  SQ+A
Sbjct: 151 SFITADDLA--DIEEFKKPTDSPDSALAGHSDTSSLPAEIVEIDASQVA 197


>AY122266-1|AAM52778.1|  369|Drosophila melanogaster SD18375p
           protein.
          Length = 369

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 380 DIEEFKSGTSKTSLEFA*H-ESSSKEASVVRILLSQIA 490
           DIEEFK  T       A H ++SS  A +V I  SQ+A
Sbjct: 161 DIEEFKKPTDSPDSALAGHSDTSSLPAEIVEIDASQVA 198


>AY060450-1|AAL25489.1|  107|Drosophila melanogaster LP07955p
           protein.
          Length = 107

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -3

Query: 219 QLLSSLGFNQNSCPNTLHTK*ICIT-QMFILQTINDI 112
           QL+ ++ +  N C  +++   ICIT ++F+++ + DI
Sbjct: 18  QLILNIAYPSNLCIKSINASAICITGEIFLMRPLEDI 54


>AE014297-1209|AAO41542.1|  107|Drosophila melanogaster CG4655-PB,
           isoform B protein.
          Length = 107

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -3

Query: 219 QLLSSLGFNQNSCPNTLHTK*ICIT-QMFILQTINDI 112
           QL+ ++ +  N C  +++   ICIT ++F+++ + DI
Sbjct: 18  QLILNIAYPSNLCIKSINASAICITGEIFLMRPLEDI 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,542,039
Number of Sequences: 53049
Number of extensions: 448687
Number of successful extensions: 849
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)