Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322A01f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 36 0.003
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 36 0.005
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 33 0.034
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 31 0.079
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 29 0.42
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 29 0.42
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 28 0.97
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 28 0.97
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 27 1.3
SPAC4H3.06 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 1.7
SPBC32H8.04c |||rRNA processing protein Fcf1 |Schizosaccharomyce... 27 1.7
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 27 2.2
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 27 2.2
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc... 26 3.0
SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomy... 25 5.2
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 25 5.2
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 25 5.2
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 25 6.8
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 6.8
SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein Vps1|Schizo... 25 6.8
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 25 6.8
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 25 6.8
SPCC1235.12c |mug146||meiotically upregulated gene Mug46|Schizos... 25 9.0
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 25 9.0
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 36.3 bits (80), Expect = 0.003
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCL-DHKMFLEKLNAEAKVCVQC 212
C+ C F L R++ C CG C CL + F+ +L KVC C
Sbjct: 66 CSLCETEFTLFRRKHHCRICGKIICKYCLKEAPGFIFRLQGSIKVCRPC 114
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 35.5 bits (78), Expect = 0.005
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKL--NAEAKVCVQC 212
C C PF ++ C CG +C++C + L L N +VC C
Sbjct: 176 CLRCRTPFTFTNRKHHCRNCGGVFCNQCSSKTLSLPHLGINQPVRVCDSC 225
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 32.7 bits (71), Expect = 0.034
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKC 152
CN C PF R+ C CG +C C
Sbjct: 33 CNNCGGPFTWFRRRHHCRWCGKLFCYNC 60
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 31.5 bits (68), Expect = 0.079
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 219 KSNYDKKIEPPSAYFKRLATVQPPDPNDSNTNYAGASSKDNEILKRLQNLKQEQVHKKVS 398
K+NY +K E + P P SN+N+ ++ LK Q+Q+ K +
Sbjct: 341 KANYARKYEATIQELQNQIGTAPNAPKISNSNW----EEERRALKADNQTLQKQLEKAIQ 396
Query: 399 TDDEIAQRLKNIKGDL 446
+++ L N K D+
Sbjct: 397 ERQDMSDFLNNFKADM 412
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 29.1 bits (62), Expect = 0.42
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 117 CPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCKKKSNYDKK 239
C GC S+ CL+ + E + + CV C KS++ K
Sbjct: 132 CEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCSIKSHHPPK 172
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 29.1 bits (62), Expect = 0.42
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCKKKSNYDK 236
C+ C P N L C C S+ C+D + + L +A C +CK S Y++
Sbjct: 266 CSACHGPGNFLC----CETCPNSFHFTCIDPPIEEKNLPDDAWYCNECKHHSLYNE 317
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 27.9 bits (59), Expect = 0.97
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +3
Query: 333 KDNEILKRLQNLKQEQVHKKVSTDDEIAQRLKNIKGD 443
K NEI+ ++ N + VH+ + +D++A RL +++ +
Sbjct: 500 KTNEIISKMLNSQDTAVHRIIEFEDQLA-RLSSVRNN 535
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 27.9 bits (59), Expect = 0.97
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 225 NYDKKIEPPSAYFKRLATVQPPDPNDSNTNYAG 323
N + I+ P AY KR+ + PN SN Y G
Sbjct: 721 NVYRLIQKPEAYLKRIVHEKLCKPNKSNKTYDG 753
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 105 KEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCK 215
K K P CG ++CS C++ F E + C QC+
Sbjct: 648 KSKLIPNCGHAFCSNCME--PFYEH---KTSTCPQCE 679
>SPAC4H3.06 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 27.1 bits (57), Expect = 1.7
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +3
Query: 222 SNYDKKIE-PPSAYFKRLATVQPPDPNDSNTNYAGASSKDNEILKRLQNLKQEQVHKKVS 398
+N +KKI +L T + + NY + +K+ LK L + QE+ K+
Sbjct: 28 ANQEKKIGLEQMGIIVQLVTEGLNEVSSDIRNYQASLTKE---LKLLVDSLQEKERSKLQ 84
Query: 399 TDDEIAQRLKNIKGDLP--SASVSEIEARLANL 491
++ Q LK + + P + +SE+EARL++L
Sbjct: 85 ATVKLEQ-LKVVSTNSPVENTQISELEARLSSL 116
>SPBC32H8.04c |||rRNA processing protein Fcf1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 192
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 384 HKKVSTDDEIAQRLKNIKGDLPSASVSEIEARLANLRGVPVQS 512
HK DD I QR+ K L + + ++ R+ + G+P+ S
Sbjct: 134 HKGTYADDCIVQRVMQHKCYLVATNDKNLKQRIRKIPGIPILS 176
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 147 KCLDHKMFLEKLNAEAKVCVQCKKKSNYDKKIEP 248
K L+ + + K EA +C+Q K N+D + P
Sbjct: 518 KLLESEDYARKRTEEAVLCIQKDVKDNFDSAVLP 551
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 324 ASSKDNEILKRLQNLKQEQVHKKVSTDDEIAQRLKNI 434
AS K E + RL+NLK++++ +K++ EIA KNI
Sbjct: 386 ASQKRLEEVNRLKNLKRKELEEKLNQVIEIAGS-KNI 421
>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 489
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +3
Query: 63 MACNTCAKPFNLLRKE-KGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCKKKSN 227
M C C + ++ K K C CG+ C C H E LN C + + N
Sbjct: 16 MCCPLCMEEIDISDKNFKPCQ-CGYRVCRFCWHH--IKEDLNGRCPACRRLYTEEN 68
>SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 306 NTNYAGASSKDNEILKRLQNLKQEQVHKKVSTDDEIAQRLKNIK 437
N+++ G S DNE L+RLQ+ K Q+ + E+ Q + ++
Sbjct: 66 NSDWKGLSF-DNEELERLQHQKMLQIQAEEQRKIELQQEQERLE 108
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 25.4 bits (53), Expect = 5.2
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Frame = +3
Query: 189 EAKVCVQCKKKSN-----YDKKIEPPSAYFKRLATVQ-----PPDPNDSNTNYAGASSKD 338
++++C + +K+ + Y+ +IE Y+K+L + PP N S NY K
Sbjct: 944 QSRICQKLEKELSIIQLTYNSRIE----YYKQLQEISDSLMPPPVSNISLNNYVKDDEKK 999
Query: 339 NEILKRLQNLKQEQVHKKVSTDDEIAQRLKNIKGDLPSASVSEI 470
+ L + + K++S + A + N+ +L + +SE+
Sbjct: 1000 QKFLNSVIIKASVILEKEISEKQDEASQTTNV-AELVNQKISEM 1042
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 117 CPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCK-KKSNYDKK 239
C GC +Y + CLD L + E C CK S+YD +
Sbjct: 286 CDGCEAAYHTSCLDPP--LTSIPKEDWYCDACKFNISDYDPR 325
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 276 TVQPPDPNDSNTNYAGASSKDNEILKRLQNLKQEQVHKKVSTDDEIA 416
T + D +SN + ++SK + KRL KQ ++ K S + + A
Sbjct: 290 TAKAQDTGESNKDNNTSTSKHKKRPKRLSKFKQAKLETKKSGNKDHA 336
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 279 VQPPDPNDSNTNYAGASSKDNEILKRLQNLKQEQVHKKVSTDDE 410
+QP +P+D +T+ G S K + + ++V ++ DD+
Sbjct: 169 IQPSEPHDVDTSKNGLSKKQHSEAQPEVQGNDDEVEEEDDDDDD 212
>SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein
Vps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 264 KRLATVQPPDP-NDSNTNYAGASSKDNEILKRL 359
KRLA ++PP P ++T + D E++K L
Sbjct: 566 KRLAAMEPPPPVLRASTTLSDREKTDTEVIKLL 598
>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 291 DPNDSNTNYAGASSKDNEILKRLQNLKQEQ 380
+PND+ TN S + ILK L N+ ++Q
Sbjct: 608 NPNDTLTNLCKDSGVQHLILKELINIGKQQ 637
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 25.0 bits (52), Expect = 6.8
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +3
Query: 342 EILKRLQNLKQEQVHKKVSTDD 407
E + ++LK++++ +KVS+DD
Sbjct: 252 EAILSFEDLKEQEIRRKVSSDD 273
>SPCC1235.12c |mug146||meiotically upregulated gene
Mug46|Schizosaccharomyces pombe|chr 3|||Manual
Length = 311
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 24 CDYEAESLTVIYVMACNTCAKPFNLLRKEKGCPG-CGFSYCSKCLDHKMFLEKLNAEAKV 200
CD + +S T A TC+ N L K+ C F+ +K ++ ++ + V
Sbjct: 153 CDSDTDSSTYFGDSASETCSSASNSLYKQTDLTSLCMFNQ-NKIQTDWSSIDPMDNDKIV 211
Query: 201 CVQCKKKSNYDKKI 242
C +K N K++
Sbjct: 212 CADFEKNFNILKEL 225
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +3
Query: 63 MACNT--CAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEA 194
M C+ C K N + C CG+ +C+ H M+ KL+ A
Sbjct: 138 MVCHDPMCDKLLNFINGHIHCRKCGYIFCN---FHSMYQIKLSIHA 180
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,043,544
Number of Sequences: 5004
Number of extensions: 38890
Number of successful extensions: 150
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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