Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322A01f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1657 - 35102751-35102868,35102987-35103504,35104065-351042... 42 2e-04
04_04_0927 + 29467121-29467168,29467518-29467604,29468180-294682... 42 4e-04
03_05_0626 + 26233178-26233233,26234083-26234284,26234800-262349... 41 7e-04
05_01_0048 + 331155-333077,333208-333354,333540-334087,334481-33... 38 0.005
01_07_0288 + 42534552-42534558,42535302-42537280,42537367-425375... 38 0.005
05_06_0273 - 26851077-26851167,26851433-26851869,26852125-268522... 36 0.015
02_05_0336 + 28033315-28033365,28033580-28033585,28033798-280338... 36 0.026
06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489... 35 0.034
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 34 0.060
01_06_0731 - 31555078-31555082,31555750-31555857,31555948-315561... 32 0.32
08_02_0295 - 15449323-15449376,15449625-15449804,15450558-154506... 31 0.42
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 31 0.74
07_03_0532 + 19171290-19171394,19173122-19173302,19173761-191742... 30 0.98
12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427,956... 30 1.3
04_04_0996 + 29990255-29990425,29990797-29990841,29991024-299910... 30 1.3
03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,971... 29 2.3
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 3.0
12_01_0014 + 105422-105520,105598-105725,105939-106101,106198-10... 28 4.0
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 28 4.0
03_05_1082 - 30239385-30239561,30239937-30240009,30240382-302404... 28 4.0
01_06_1049 - 34114487-34114579,34115406-34115557,34115840-341164... 28 4.0
10_08_0361 + 17207657-17207701,17208850-17209773 28 5.2
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 28 5.2
02_05_0389 + 28551649-28551903,28552328-28552402,28552482-285526... 28 5.2
11_02_0083 - 8116997-8117590,8118342-8118745,8119073-8119671,812... 27 6.9
11_02_0075 - 8051057-8051815 27 6.9
06_03_1309 + 29223197-29223240,29223358-29223592,29223695-292237... 27 6.9
05_05_0353 - 24338717-24338946,24339046-24339134,24339421-243395... 27 6.9
09_02_0237 + 6141048-6141962 27 9.1
03_05_0810 - 27863988-27864281 27 9.1
>04_04_1657 - 35102751-35102868,35102987-35103504,35104065-35104211,
35104289-35106262,35106964-35107089,35107178-35107264,
35107335-35107424,35107725-35107811,35108248-35108300,
35109339-35109387
Length = 1082
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Frame = +3
Query: 21 ICDYEAESLTVIYVMACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEA-- 194
IC ++ S++ + C++C +PF RK C CG +C C K L+
Sbjct: 625 ICQHK--SVSGMEQSQCSSCRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGK 682
Query: 195 --KVCVQC--KKKSNYDKKIEPPSAYFKRLATVQPPDPNDSNTNYAGASSKDNEILKRLQ 362
+VC C K D I R+ D DS N AS+ ++++K L
Sbjct: 683 PYRVCDSCYLKLSKVLDSGIGHNKNNTPRIPGDSKADKMDSKGNRV-ASANSSDMIKNLD 741
Query: 363 NLKQEQVHK 389
+Q K
Sbjct: 742 VKAAKQTKK 750
>04_04_0927 +
29467121-29467168,29467518-29467604,29468180-29468269,
29468547-29468741,29469056-29471080,29471208-29471354,
29471520-29471923,29472015-29472144
Length = 1041
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +3
Query: 3 FFFGT*ICDYEAESLTVIYVMACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKL 182
F F IC ++ S+ V C++C F RKE C CG +CS C +K+ + L
Sbjct: 596 FNFTAAICLHKTMSMKDQSV--CSSCQMVFGFTRKEHNCYNCGSMFCSSCTSNKITMAAL 653
Query: 183 ----NAEAKVCVQC 212
N +VC C
Sbjct: 654 APDTNRRYRVCDAC 667
>03_05_0626 +
26233178-26233233,26234083-26234284,26234800-26234968,
26235767-26238768
Length = 1142
Score = 40.7 bits (91), Expect = 7e-04
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 51 VIYVMACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLE-KLNAEAKVCVQCKK 218
V+ C C+ F+L ++ C CG +CS C +M L + ++ ++C CKK
Sbjct: 67 VVDATHCQGCSVQFSLFTRKHHCQRCGGLFCSNCTQQRMVLRGQGDSPVRICDPCKK 123
>05_01_0048 +
331155-333077,333208-333354,333540-334087,334481-334616
Length = 917
Score = 37.9 bits (84), Expect = 0.005
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHK 164
C++C +PF RK C CG +C+ C K
Sbjct: 432 CSSCQQPFGFTRKRHNCYNCGLVHCNACTSRK 463
>01_07_0288 +
42534552-42534558,42535302-42537280,42537367-42537513,
42537982-42538526,42538906-42538981,42539357-42539437
Length = 944
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEA----KVCVQCKKKSN 227
C +C +PF RK C CG +C+ C K L +VC C K N
Sbjct: 456 CASCRQPFGFTRKRHNCHNCGLVHCNACTSRKAVRAALAPNPAKPYRVCDSCFLKLN 512
>05_06_0273 -
26851077-26851167,26851433-26851869,26852125-26852271,
26852352-26854415,26854792-26854908,26855007-26855093,
26855350-26855439,26855523-26855609,26856736-26856810
Length = 1064
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKL----NAEAKVCVQCKKK 221
C+ C +PF RK C CG +C C K+ L +VC C K
Sbjct: 629 CSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMK 683
>02_05_0336 +
28033315-28033365,28033580-28033585,28033798-28033884,
28034741-28034830,28035736-28037778,28037916-28038062,
28038148-28038560,28038656-28038755
Length = 978
Score = 35.5 bits (78), Expect = 0.026
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKL----NAEAKVCVQC---KKKSN 227
C+ C F RK+ C CG +C+ C ++K+ L + +VC C +K
Sbjct: 559 CSNCQLTFGFTRKKHNCYNCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKVE 618
Query: 228 YDKKIEP 248
+K++P
Sbjct: 619 EHRKLDP 625
>06_03_1450 +
30246702-30247346,30248603-30248689,30248789-30248920,
30249016-30249162,30250375-30250440,30250519-30250629,
30251551-30251584,30251667-30251743,30251829-30251906
Length = 458
Score = 35.1 bits (77), Expect = 0.034
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +3
Query: 60 VMACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEA---KVCVQCKKKSNY 230
V C C F+ + C CG +C KC + L +A+A +VC +C +
Sbjct: 343 VTKCTACTADFSAFNRRHHCRNCGDIFCDKCTQGRTPL-TTDADAQPVRVCDRCMDAMDI 401
Query: 231 DKKIEPPSA 257
+KK S+
Sbjct: 402 NKKSSSASS 410
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 34.3 bits (75), Expect = 0.060
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFL-EKLNAE-AKVCVQCKKKSNYDKKI 242
C +CA F+ + C CG +C KC + L + NA +VC +C + + I
Sbjct: 376 CYSCAVDFSPFNRRHHCRNCGEIFCDKCSQGRTALTAEDNAPLVRVCDRCMAEVSQRLSI 435
Query: 243 EPPSAYFKRLATVQ 284
+A R ATVQ
Sbjct: 436 AQEAA--NRSATVQ 447
>01_06_0731 -
31555078-31555082,31555750-31555857,31555948-31556166,
31556320-31556415,31557264-31557387
Length = 183
Score = 31.9 bits (69), Expect = 0.32
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Frame = +3
Query: 42 SLTVIYVMACNTCAKPFNLLRKEKGCPGC--GFSYCSKCLDHKMFLEKLNAEAKVCVQCK 215
+L +++++A A P + +G C G YC D L K+C C
Sbjct: 18 TLILLHLLAGAAGAAPPLVGVSPQGTSACPDGRFYCRNAGDTPRLLFSSVVNDKICDCCD 77
Query: 216 KKSNYDKKIEPPSAYFKRLATVQPPDPNDSNTNYAGASSKDNEILKRLQNLKQEQVHKKV 395
Y+ I P+ + + V+ D D N G KD+ + ++++ ++ H +
Sbjct: 78 GSDEYESGIRCPNT-CRNINDVRKDD--DVGINRKGV-MKDDGVGMNIKDVAEDDHHDRK 133
Query: 396 STDD--EIAQRLKNIK 437
T D ++ Q+LK +K
Sbjct: 134 RTLDIEDLIQKLKGLK 149
>08_02_0295 -
15449323-15449376,15449625-15449804,15450558-15450604,
15450695-15450875,15451348-15451452,15452414-15452473,
15452957-15453041,15453337-15453353
Length = 242
Score = 31.5 bits (68), Expect = 0.42
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 216 KKSNYDKKIEPPSAYFKRLATVQPPDPNDSNTNYAGASSKDNEILKRLQNLKQEQVHKKV 395
KK+NY K KR+AT QP ++ T Y + +N L+ + ++H K
Sbjct: 5 KKTNYTKLTTLVLKELKRVATTQPASSSEITTIYEVVQNSEN--LRMSKGQMVHEIHSKN 62
Query: 396 STDDEI 413
S + E+
Sbjct: 63 SWNKEM 68
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 30.7 bits (66), Expect = 0.74
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKC---LDHKMFLEKLNAEAKVCVQCKKKSNYDKK 239
C C PF+ CG S C C L +A + C C + + +
Sbjct: 17 CPVCLSPFDAASAAPRVLPCGHSLCGPCIASLPPASASASASAASLRCPLCSQCVPFSRA 76
Query: 240 IEPPSAYFKRLATVQ--PPDPNDSNTNYAGAS 329
+ PS+ K LA + P PN S + A A+
Sbjct: 77 L-GPSSLPKNLALISLLPSPPNPSRSRTAAAA 107
>07_03_0532 +
19171290-19171394,19173122-19173302,19173761-19174245,
19174877-19176283,19176413-19176628
Length = 797
Score = 30.3 bits (65), Expect = 0.98
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +3
Query: 222 SNYDKKIEPPSAYFKRLATVQPPDPNDSNTNYAGASSKDNEI--LKRLQNLKQEQVHKKV 395
S+ +KK+E T N + K+ E+ L+R L +E++HK+
Sbjct: 629 SSLEKKLESQKNLSSAYITALDASEAQKNKFASRFELKEAEVEELRRKIRLLEEEIHKEK 688
Query: 396 STDDEIAQRLKNIKGDLPSASVSE 467
+ E+ + +N+K S ++S+
Sbjct: 689 AQSSELGVQCQNLKEQFTSRALSQ 712
>12_01_0961 +
9566730-9566998,9567096-9567187,9567294-9567427,
9567542-9567591,9569026-9569100,9569179-9569734
Length = 391
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/78 (20%), Positives = 36/78 (46%)
Frame = +3
Query: 126 CGFSYCSKCLDHKMFLEKLNAEAKVCVQCKKKSNYDKKIEPPSAYFKRLATVQPPDPNDS 305
CG S+C KCL H K K C +C++ + + + + + + P +
Sbjct: 179 CGHSFCMKCLKHA--AAKC---GKRCPKCRQLISNSRSCTVNTVLWNTIQLLFPSETEAR 233
Query: 306 NTNYAGASSKDNEILKRL 359
T+ A +S ++++ +++
Sbjct: 234 RTSIASSSETNDDLAQQI 251
>04_04_0996 +
29990255-29990425,29990797-29990841,29991024-29991098,
29991481-29991691,29992057-29992442,29993202-29993425,
29993529-29993664,29993699-29993761,29993842-29994021
Length = 496
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 117 CPGCGFSYCSKCLDHKMFLEK 179
CP C FS+C++C D + EK
Sbjct: 264 CPKCFFSFCARCRDRRHIGEK 284
>03_02_0596 +
9714022-9714065,9714799-9714868,9714978-9715883,
9715973-9716146,9716260-9716373,9716975-9717033,
9717170-9717236,9717305-9717356,9718070-9718488,
9718786-9718847,9719305-9719374,9719730-9719831,
9719933-9720063,9720492-9720606,9720792-9720827
Length = 806
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 291 DPNDSNTNYAGASSKDNEILKRLQNLKQEQVHKKVSTDDEIAQRLKNIKG 440
D N+ + G + N++ +NLKQE + V + D+ + LK + G
Sbjct: 124 DGNNQSQEANGEADDINDVSANSENLKQESIANSVES-DKAPEELKEVSG 172
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 3.0
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKC 152
C C F +L + C CG +C++C
Sbjct: 70 CYDCDAQFTILNRRHHCRHCGRVFCARC 97
>12_01_0014 +
105422-105520,105598-105725,105939-106101,106198-106310,
106787-106825,107026-107109,107193-107241,107331-107422,
107680-107809,107906-107982,108058-109676,110024-110221,
110287-110825
Length = 1109
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 69 CNTCAKPFNLLRKE-KGCPGCGFSYCSKCLDHKM-FLEKLNAEAKVCVQCKKKSNYDKKI 242
C CA+ ++ ++ K C CG+ C C H + EK + E + C C+ + + D+ +
Sbjct: 11 CPLCAEDMDITDQQLKPCK-CGYEICVWCWHHIIDMAEKEDTEGR-CPACRTRYDKDRIV 68
Query: 243 E 245
+
Sbjct: 69 K 69
>11_01_0014 +
108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 69 CNTCAKPFNLLRKE-KGCPGCGFSYCSKCLDHKM-FLEKLNAEAKVCVQCKKKSNYDKKI 242
C CA+ ++ ++ K C CG+ C C H + EK + E + C C+ + + D+ +
Sbjct: 68 CPLCAEDMDITDQQLKPCK-CGYEICVWCWHHIIDMAEKEDTEGR-CPACRTRYDKDRIV 125
Query: 243 E 245
+
Sbjct: 126 K 126
>03_05_1082 -
30239385-30239561,30239937-30240009,30240382-30240432,
30240521-30240978,30241099-30241435,30241836-30241935,
30243880-30244003
Length = 439
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 60 VMACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVC 203
++AC TC LLR+ C ++C +C+ K+ E+++ VC
Sbjct: 16 LVACMTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVD-HCPVC 62
>01_06_1049 -
34114487-34114579,34115406-34115557,34115840-34116418,
34117551-34117941,34118170-34118583
Length = 542
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 327 SSKDNEILKRLQNLKQEQVHKKVSTDDEIAQRLKNIKGDLPSASVSEIEARLANL 491
SS +EIL +L K+EQV + D DLP ++E A+L ++
Sbjct: 421 SSNTDEILDQLVQTKREQVVNTIYLHDNSFPSYLPKSMDLPDQKITEKRAKLQDI 475
>10_08_0361 + 17207657-17207701,17208850-17209773
Length = 322
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +3
Query: 297 NDSNTNYAGASSKDNEILKRLQNLKQEQVHKKVSTDDEIAQRLKNIKGDLPSA------- 455
N+ YAG +DN++L + + H V +D++ + N++G+
Sbjct: 125 NEQILMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKLHVFI-NVRGEKTIGLETKRWY 183
Query: 456 SVSEIEARLANLRGVPVQS 512
+V++++ + NL G+P S
Sbjct: 184 TVADVKLMIENLEGLPACS 202
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 27.9 bits (59), Expect = 5.2
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKC 152
C C F + + C CG +C KC
Sbjct: 42 CYDCDTQFTIFNRRHHCRRCGRIFCGKC 69
>02_05_0389 +
28551649-28551903,28552328-28552402,28552482-28552605,
28552692-28552978,28553147-28553482,28553813-28553869,
28554156-28554382,28554465-28554627,28554912-28554938
Length = 516
Score = 27.9 bits (59), Expect = 5.2
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKC 152
C C+ + + CPGC F++C+ C
Sbjct: 311 CPRCSAACLEVDNDAQCPGCFFTFCTLC 338
>11_02_0083 -
8116997-8117590,8118342-8118745,8119073-8119671,
8120226-8120266
Length = 545
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 393 LSCELVLALGSVIVLKSHCLLNLLQHSLYCYHLDLVVE 280
L C L I+ + N L H+++C H DL +E
Sbjct: 115 LECCCTLGFSEAILQQDRNGCNALHHAIHCGHKDLALE 152
>11_02_0075 - 8051057-8051815
Length = 252
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 393 LSCELVLALGSVIVLKSHCLLNLLQHSLYCYHLDLVVE 280
L C LG VI+ + N L H++ C H DL +E
Sbjct: 150 LRCCSESGLGDVILKQDGSGCNALHHAIRCGHKDLALE 187
>06_03_1309 +
29223197-29223240,29223358-29223592,29223695-29223783,
29223870-29223968,29224065-29224158,29224297-29224514,
29224861-29224967,29225298-29225472,29225596-29225743,
29226548-29226596,29228016-29228162,29229990-29229996,
29230417-29230482,29230773-29231991,29232073-29233149,
29233226-29233355,29233519-29233617,29233817-29233878,
29234429-29234533
Length = 1389
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +3
Query: 231 DKKIEPPSAYFKRLATVQPPDPNDSNTNYAGASSKDNEILKRLQNLKQEQVHKKVSTDDE 410
+K + PSA K+ VQPP ++T+ S +I ++ K E K++
Sbjct: 97 NKWVRDPSAPTKQTEAVQPPQAQAAHTSCEDPQSCRQQI---SEDFKNEAPIWKLTCYAH 153
Query: 411 IAQRLKNIKGDLPSASVSEIEAR 479
+ NIKGD+ S E+ A+
Sbjct: 154 LRNGPCNIKGDI---SFEELRAK 173
>05_05_0353 -
24338717-24338946,24339046-24339134,24339421-24339500,
24339768-24339902,24340231-24340461,24340540-24340634,
24340734-24340819,24341467-24341570,24341674-24341805,
24341883-24341999,24342170-24342229,24342779-24342820,
24342878-24342952,24343127-24343177,24343256-24343436,
24343548-24343594,24343710-24343775
Length = 606
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 174 EKLNAEAKVCVQCKKKSNYDKKIEPP--SAYFKRLATVQPPDPNDSNTNYAGAS 329
++++ +A+ ++C +K+ Y + EPP + R+A + + N SNT S
Sbjct: 212 KQVDNDARYSLECNRKNAYAESTEPPMLAKSATRIAILGVSNLNSSNTRCINVS 265
>09_02_0237 + 6141048-6141962
Length = 304
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +3
Query: 36 AESLTVIYVMACNTCAKPFNLLRKEKGCPGCGFSYCSKCL 155
A S T + C C +G GC ++C+ CL
Sbjct: 115 APSATTTSFLFCKICMDDVPASDAHRGSHGCAHAFCAACL 154
>03_05_0810 - 27863988-27864281
Length = 97
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +3
Query: 24 CDYEAESLTVIYVMACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDH 161
CD + Y ++C+ P + GC C +Y SKC+++
Sbjct: 40 CDQACKESCKGYGRDSSSCSAPCGDPSNKDGCESCLEAYYSKCVNY 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,866,008
Number of Sequences: 37544
Number of extensions: 241190
Number of successful extensions: 766
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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