BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS322A01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical p... 61 5e-10
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 40 8e-04
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 38 0.003
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 37 0.008
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 37 0.008
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 35 0.041
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 35 0.041
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 34 0.071
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 34 0.071
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 34 0.071
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 34 0.071
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 34 0.071
Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z22181-10|CAA80187.1| 266|Caenorhabditis elegans Hypothetical p... 32 0.29
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 32 0.29
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 32 0.29
AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical ... 32 0.29
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 31 0.38
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 31 0.50
AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical ... 31 0.50
Z37140-5|CAA85499.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.66
AL132862-15|CAB60549.1| 703|Caenorhabditis elegans Hypothetical... 31 0.66
Z48006-4|CAA88048.1| 429|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical pr... 29 1.5
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL132862-26|CAB60561.1| 874|Caenorhabditis elegans Hypothetical... 29 1.5
Z37140-4|CAA85498.1| 308|Caenorhabditis elegans Hypothetical pr... 29 2.0
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 2.0
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 29 2.0
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 29 2.0
Z81072-6|CAB03017.2| 196|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z47358-10|CAA87438.1| 507|Caenorhabditis elegans Hypothetical p... 28 3.5
Z47356-9|CAA87420.1| 507|Caenorhabditis elegans Hypothetical pr... 28 3.5
U80443-4|AAD32268.1| 202|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 28 3.5
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr... 28 4.7
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 28 4.7
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 28 4.7
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 28 4.7
AC024204-4|AAF36039.1| 126|Caenorhabditis elegans Hypothetical ... 28 4.7
Z83123-6|CAD45601.1| 327|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 27 6.2
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 27 6.2
U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical pr... 27 6.2
U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical p... 27 6.2
U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated p... 27 6.2
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 27 6.2
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 27 6.2
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 27 6.2
AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein. 27 6.2
AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 27 6.2
Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 27 8.1
AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical ... 27 8.1
AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical
protein R11D1.10a protein.
Length = 394
Score = 60.9 bits (141), Expect = 5e-10
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 23/172 (13%)
Frame = +3
Query: 63 MACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKL-NAEAKVCVQCKKKSNYDKK 239
+ C C ++LL +E GC C S+C KCL H+ + L + VC C +K K
Sbjct: 5 ICCTNCRTKYSLLNREAGCSNCALSFCKKCLPHRAIIPTLSDLPMIVCNNCYQKLE-SAK 63
Query: 240 IEPPSAYFKRLATVQPPDPNDSNTNYAG----------ASSKDNEI---------LKRLQ 362
++P + +T P + N SN N+ G + + N+I +
Sbjct: 64 MKPSATI---TSTPLPDNSNKSNKNWWGDGLPPPSFRNSHTNQNQIKNSEVKATKFRNSP 120
Query: 363 NLKQEQVHKKVSTDDEIAQRLK---NIKGDLPSASVSEIEARLANLRGVPVQ 509
+ +Q T+D +RLK +I + S+SEIE RLA LR V+
Sbjct: 121 EIPSQQTKPNYPTNDLEQRRLKLREDISPQIEPLSISEIEERLAKLRECDVE 172
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 40.3 bits (90), Expect = 8e-04
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEK--LNAEAKVCVQC-KKKSNYDKK 239
C C+ PFN +R+ C CG +C KC + + + + + + +VC C + N
Sbjct: 572 CTACSMPFNFVRRRHHCRNCGRIFCHKCSCNTISIPEHGYDRKVRVCNLCYVHRLNSFGC 631
Query: 240 IEPPSAYFKRLATVQPPDPNDSNTNYAGASS 332
EP S + ATV P + A ASS
Sbjct: 632 NEPMSQVNENGATV-PSVTEQQSAQTASASS 661
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEK--LNAEAKVCVQCKKKSNYDKKI 242
C C F++ ++ C CG +C KC ++ L + + E +VC C +K + K
Sbjct: 163 CYRCRSVFSVFTRKHHCRACGQIFCDKCSSRELALPQFGIEKEVRVCETCYEKKVAEVKE 222
Query: 243 EPPS 254
P+
Sbjct: 223 RYPA 226
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAK 197
C C F ++ + C CG C C + K FLE L E K
Sbjct: 547 CMLCNTRFTIITRRHHCRACGRVLCGSCCNEKAFLEYLQEEGK 589
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAK 197
C C F ++ + C CG C C + K FLE L E K
Sbjct: 547 CMLCNTRFTIITRRHHCRACGRVLCGSCCNEKAFLEYLQEEGK 589
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical protein
VT23B5.2 protein.
Length = 931
Score = 34.7 bits (76), Expect = 0.041
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAE--AKVCVQC 212
C+ C F L ++ C CG +CS C + + ++N +VC +C
Sbjct: 869 CDDCEHKFTLADRKHHCRNCGQIFCSTCSRFESHITRMNISRPVRVCRKC 918
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 34.7 bits (76), Expect = 0.041
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAE--AKVCVQC 212
C+ C F L ++ C CG +CS C + + ++N +VC +C
Sbjct: 869 CDDCEHKFTLADRKHHCRNCGQIFCSTCSRFESHITRMNISRPVRVCRKC 918
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 33.9 bits (74), Expect = 0.071
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQC 212
C C K F+L ++ C CG YC+ C + + + C C
Sbjct: 1150 CTECGKVFSLTVRKHHCRVCGKIYCNPCSSKSVRIASAKNPVRACNTC 1197
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 33.9 bits (74), Expect = 0.071
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQC 212
C C K F+L ++ C CG YC+ C + + + C C
Sbjct: 1152 CTECGKVFSLTVRKHHCRVCGKIYCNPCSSKSVRIASAKNPVRACNTC 1199
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 33.9 bits (74), Expect = 0.071
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAK 197
C C F ++ + C CG C C + K FLE L E K
Sbjct: 544 CPNCML-FTIITRRHHCRACGRVLCGSCCNEKAFLEYLQEEGK 585
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 33.9 bits (74), Expect = 0.071
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQC 212
C C K F+L ++ C CG YC+ C + + + C C
Sbjct: 1152 CTECGKVFSLTVRKHHCRVCGKIYCNPCSSKSVRIASAKNPVRACNTC 1199
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 33.9 bits (74), Expect = 0.071
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAK 197
C C F ++ + C CG C C + K FLE L E K
Sbjct: 544 CPNCML-FTIITRRHHCRACGRVLCGSCCNEKAFLEYLQEEGK 585
>Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical
protein F22G12.4 protein.
Length = 861
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 78 CAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCV 206
C F+L ++ C CG CSKC + M + K E +V V
Sbjct: 803 CGARFSLTSRKHHCRHCGRHVCSKCSETTMPIAKYGEEKRVRV 845
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 32.3 bits (70), Expect = 0.22
Identities = 21/83 (25%), Positives = 32/83 (38%)
Frame = +3
Query: 213 KKKSNYDKKIEPPSAYFKRLATVQPPDPNDSNTNYAGASSKDNEILKRLQNLKQEQVHKK 392
KKKSN K + + K +T +PP PN T A+ N+ + N
Sbjct: 229 KKKSNSRKNKKNKKSKGKSTSTSEPPTPNQPETGVQTANELRNDAPESNVNTAMSIQSPV 288
Query: 393 VSTDDEIAQRLKNIKGDLPSASV 461
T + + K D+P + V
Sbjct: 289 QDTPEPDVKTASEAKNDIPESGV 311
>Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical
protein VF11C1L.1 protein.
Length = 1482
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLN--AEAKVCVQCKKK 221
C C + F R+ C CG +C+KC + L E ++C C +K
Sbjct: 116 CYQCEERFTTFRRRHHCRLCGQIFCAKCCSSHIDGAALGYMGELRLCDYCARK 168
>Z22181-10|CAA80187.1| 266|Caenorhabditis elegans Hypothetical
protein ZK632.12 protein.
Length = 266
Score = 31.9 bits (69), Expect = 0.29
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 69 CNTCAKP-FNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAE-AKVCVQC 212
C C K FNL+++ C CG C C ++ ++ + +VC C
Sbjct: 158 CMVCGKTQFNLVQRRHHCRNCGRVVCGACSSRTFRIDNVHKKPVRVCDHC 207
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 63 MACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEK-LNAEAKVCVQCKKKSNY 230
++C C PFN ++ CG + C +C+ + L +C C++ + Y
Sbjct: 114 LSCGICYDPFNTGKRIPKVFPCGHTICLQCIKKLLNTRTFLGGNTVICPSCRQNTRY 170
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCKKKSNYDKK 239
C+ C F ++ + C CG +C CL + + A VC C N D K
Sbjct: 350 CSNCDTSFARVKVKPHCLHCGRIFCMNCLKDTVPSGPNHRPANVCKVCHTLLNRDTK 406
>AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical
protein VF11C1L.1 protein.
Length = 1482
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLN--AEAKVCVQCKKK 221
C C + F R+ C CG +C+KC + L E ++C C +K
Sbjct: 116 CYQCEERFTTFRRRHHCRLCGQIFCAKCCSSHIDGAALGYMGELRLCDYCARK 168
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 246 PPSAYFKRLATVQPPDPNDSNTNYAGASSKDNE-ILKRLQNL-KQEQVHKKVSTDDEIAQ 419
PP ++ A++ PP P+D NT +SS+ +E I + Q L + + +A
Sbjct: 30 PPPPPHRKPASLSPP-PDDENTIRPPSSSESSENIPEEPQELITPNTTRRSLGPKPTVAP 88
Query: 420 RLKNIKGDLPSASVSEIEAR 479
+ + G LPS+S S++ ++
Sbjct: 89 KPLFLNGLLPSSSTSDVSSQ 108
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/45 (24%), Positives = 19/45 (42%)
Frame = +3
Query: 78 CAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQC 212
C+ FN++ + C CG+ C C + + VC +C
Sbjct: 787 CSTEFNIINRRHHCRDCGWLICKFCKGQAPLSKYDFTKQNVCSEC 831
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 31.1 bits (67), Expect = 0.50
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDH-KMFLEKLNAEAKVCVQCKKKSNYDKKIE 245
C C +PFN K CG ++C++C+ + + + + E C + + KSN + +
Sbjct: 22 CQVCYQPFNETTKLARSLHCGHTFCTECIRNVQNYGNSPHLECPTC-RAETKSNIE-NVA 79
Query: 246 PPSAYF---KRLATVQPP--DPNDSNTNYAGASSKDNEILKRLQNLKQE 377
P + + + PP P S++ + +++D I + + L E
Sbjct: 80 PNFSIMELARNFGLLGPPVDAPRTSSSCCSNKTNRDEMIDNKFRELLVE 128
>AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical
protein Y42H9AR.3 protein.
Length = 563
Score = 31.1 bits (67), Expect = 0.50
Identities = 26/121 (21%), Positives = 45/121 (37%)
Frame = +3
Query: 63 MACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCKKKSNYDKKI 242
+ C CA F L R+ C CG C C FL + + + +
Sbjct: 183 VCCPLCASRFGLTRRRHHCRLCGRVLCHSC---SKFL-SFDTAKTLTSSSNPLGDTHIIV 238
Query: 243 EPPSAYFKRLATVQPPDPNDSNTNYAGASSKDNEILKRLQNLKQEQVHKKVSTDDEIAQR 422
E P+ +QP + + ++ S K + +KR ++VH + ++ IA
Sbjct: 239 EEPNTVENEQELLQPEE--NGRRSFFSLSQKSMDKMKRAMAGAVQKVHSAATGEEIIAGA 296
Query: 423 L 425
L
Sbjct: 297 L 297
>Z37140-5|CAA85499.1| 312|Caenorhabditis elegans Hypothetical
protein ZK899.6 protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.66
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 135 SYCSKCLDHKMFLEKLNAEAKVCVQCKK----KSNYDKKIEPPSAYFKRLATVQPPDPND 302
S C KC M +E+ N EAKV + K+ KS Y I+ A F + T D
Sbjct: 88 SECKKC---GMCMERFNEEAKVIIHSKQCTNYKSEYSTFIQNSKALFGNMLT-----SYD 139
Query: 303 SNTNYAGASSKDNEILKRLQNLKQ 374
S N D I++ ++LKQ
Sbjct: 140 SLCNLFQYFETDERIIQIREDLKQ 163
>AL132862-15|CAB60549.1| 703|Caenorhabditis elegans Hypothetical
protein Y73F8A.21 protein.
Length = 703
Score = 30.7 bits (66), Expect = 0.66
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +3
Query: 165 MFLEKLNAEAKVCVQCKKKSNYDKKIEPPSAYFKRLATVQPPDPNDSNTNYAGASSKDN- 341
M LEK AE K K+ S ++ PP A KR AT+ + N+ +N
Sbjct: 446 MSLEKAKAEKK-----KEMSTQTDRLPPPRALLKRQATIDEDSEEPARQNFRLLQPPNNF 500
Query: 342 EILKRLQNLKQEQVHKKVSTDDEIAQRLKNIKGDLPS 452
I + L +L+ + + + A + N PS
Sbjct: 501 YITEMLDDLRNNHAENHLISLNFDASNVSNAIASRPS 537
>Z48006-4|CAA88048.1| 429|Caenorhabditis elegans Hypothetical
protein F19C6.3 protein.
Length = 429
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +3
Query: 75 TCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCKKKSNYDKKIEPPS 254
TC P ++RK+ CP CG +C + + E C + +DKK+ S
Sbjct: 255 TCTHP--MIRKDDCCPSCG----EQCFYESHKIANPHGEVFWPGDCYRCQCWDKKVHCSS 308
Query: 255 AYFKRLATVQPP 290
Y AT +PP
Sbjct: 309 EY----ATCEPP 316
>Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical
protein F23B2.10 protein.
Length = 393
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPG-CGFSYCSKCLDHK 164
C+ C K ++ K K C G CG S C C D K
Sbjct: 9 CSKCEKIYDD-NKRKICSGKCGHSICESCFDRK 40
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 213 KKKSNYDKKIEPPSAYFKRLATVQPPDPNDSNTNYAGASSKDNEILKRLQ-NLKQEQVHK 389
K++ +KK + K+ + D A +D L++ N+K E K
Sbjct: 1013 KQEEEEEKKRKEKELEMKKNKEEEEKLKKDIEAKSLAAGKEDKSALRKSALNMKDEDAKK 1072
Query: 390 KVSTDDEIA 416
KV+TD+++A
Sbjct: 1073 KVATDEKVA 1081
>AL132862-26|CAB60561.1| 874|Caenorhabditis elegans Hypothetical
protein Y73F8A.33 protein.
Length = 874
Score = 29.5 bits (63), Expect = 1.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 63 MACNTCAKPFNLLRKEKGCPGCG 131
+ C+TC P + + GCP CG
Sbjct: 811 LRCSTCKLPVHFVCSHDGCPSCG 833
>Z37140-4|CAA85498.1| 308|Caenorhabditis elegans Hypothetical
protein ZK899.5 protein.
Length = 308
Score = 29.1 bits (62), Expect = 2.0
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 135 SYCSKCLDHKMFLEKLNAEAKVCVQCKK----KSNYDKKIEPPSAYFKRLATVQPPDPND 302
S C KC M +E+ N EA+V + K+ KS Y I+ A F + T D
Sbjct: 88 SECKKC---GMCMERFNEEAEVIIHSKQCTNYKSEYSTFIQNSKALFGNMLT-----SYD 139
Query: 303 SNTNYAGASSKDNEILKRLQNLKQ 374
S N D I++ ++LKQ
Sbjct: 140 SLCNLFQYFETDERIIQIREDLKQ 163
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.1 bits (62), Expect = 2.0
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +3
Query: 69 CNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLN-AEAKVCVQ--CKKKSNYDKK 239
C TC +P C GCG C C FL+ A K ++ KK+ N +KK
Sbjct: 112 CCTCCRPC--------CCGCGCGCCG-CGGGGHFLKSTAMARPKPLIEEKAKKQENDEKK 162
Query: 240 IEPPSAYFKRLATVQPPDPNDSNTNY 317
S LA+V+ PN ++ NY
Sbjct: 163 NREASRNCCDLASVEVRRPNFADYNY 188
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Frame = +3
Query: 213 KKKSNYDKKIEPPSAYFKRLATVQPPDP------NDSNTNYAGASSKDNEILKRLQNLKQ 374
K+K +++++ +P +R TV P DP + + +A K ++ +KRL N KQ
Sbjct: 530 KRKISHEEEHDPTPESVEREPTVSPNDPRERLRLKERDEQFAKMVQKRSQQVKRLINAKQ 589
Query: 375 EQVHKKVSTDDEIAQRLKNIKGDLPSASVSEIEARLANLRGVP 503
+ + + A KG + + S +E E ++ + P
Sbjct: 590 FKKQEAATKKPRKALAYNLAKG-IAATSSTEPEDKVTSSEQTP 631
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Frame = +3
Query: 213 KKKSNYDKKIEPPSAYFKRLATVQPPDP------NDSNTNYAGASSKDNEILKRLQNLKQ 374
K+K +++++ +P +R TV P DP + + +A K ++ +KRL N KQ
Sbjct: 530 KRKISHEEEHDPTPESVEREPTVSPNDPRERLRLKERDEQFAKMVQKRSQQVKRLINAKQ 589
Query: 375 EQVHKKVSTDDEIAQRLKNIKGDLPSASVSEIEARLANLRGVP 503
+ + + A KG + + S +E E ++ + P
Sbjct: 590 FKKQEAATKKPRKALAYNLAKG-IAATSSTEPEDKVTSSEQTP 631
>Z81072-6|CAB03017.2| 196|Caenorhabditis elegans Hypothetical
protein F30A10.9 protein.
Length = 196
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 354 RLQNLKQEQVHKKVSTDDEIAQRLKNIKGDLPSASVSEIEARLANLRGVPV 506
R+Q LK E HK DD + QR+ K + + +++ R+ + GVP+
Sbjct: 126 RVQRLKCE--HKGTYADDCLVQRVTQHKCYIVATCDRDLKRRIRKIPGVPI 174
>Z47358-10|CAA87438.1| 507|Caenorhabditis elegans Hypothetical
protein ZK1307.8 protein.
Length = 507
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 108 EKGCPGCG--FSYCSKCLDHKMFLEKLNAEAKVCVQCKKKSNYDKKIEPPS 254
E G CG F YCS F+ K+C C YD ++ P+
Sbjct: 73 EPGTSACGNAFFYCSNVGHKGNFIPTNRVNDKLCDCCDGSDEYDSGVDCPN 123
>Z47356-9|CAA87420.1| 507|Caenorhabditis elegans Hypothetical
protein ZK1307.8 protein.
Length = 507
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 108 EKGCPGCG--FSYCSKCLDHKMFLEKLNAEAKVCVQCKKKSNYDKKIEPPS 254
E G CG F YCS F+ K+C C YD ++ P+
Sbjct: 73 EPGTSACGNAFFYCSNVGHKGNFIPTNRVNDKLCDCCDGSDEYDSGVDCPN 123
>U80443-4|AAD32268.1| 202|Caenorhabditis elegans Hypothetical
protein C24A11.1 protein.
Length = 202
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/92 (25%), Positives = 32/92 (34%)
Frame = +3
Query: 63 MACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCKKKSNYDKKI 242
M C C F +++ G GC YC EK N + Q + + +
Sbjct: 92 MLCKAC---FGIVKNPDGSYGCSNFYCWSEPRGNFRKEKANYNKVINKQICRARKFKQDG 148
Query: 243 EPPSAYFKRLATVQPPDPNDSNTNYAGASSKD 338
E A K P D +D N A +S D
Sbjct: 149 EDLQACSKSNLPKTPADLSDREMNSAKSSESD 180
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 60 VMACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHK 164
++ C C ++ R + P CG S C C +H+
Sbjct: 88 MLQCGVCQLTYSSQRIPRIHPSCGKSVCEDCKEHE 122
>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical
protein F31C3.3 protein.
Length = 2029
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = +3
Query: 264 KRLATVQPPDPNDSNTNYAGA--SSKDNEILKRLQ---NLKQEQVHKKVSTDDEIAQRLK 428
K+ T P P+D + +D+E RL+ LK+++V++ + + +RL
Sbjct: 698 KKEFTEASPLPSDVRIEFLEVWLELEDDEFENRLKLSAQLKEDEVYESERREQLLEERLF 757
Query: 429 NIKGDLPSASVSEIEA 476
N+K P S IEA
Sbjct: 758 NLKKTAPFLSKEMIEA 773
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +3
Query: 315 YAGASSKDNEILKRLQNLKQEQVHKKVSTDDEIAQRLKNIKGDLPSASVSEIEARLANLR 494
+A ++++E LKR Q+ K+E+ K+ + EI + + ++ D S + +A +R
Sbjct: 601 FAKEEAEESERLKREQSEKEEKQKKEAAALAEIEREKRELELDFQRRRSSVLATHVAVIR 660
Query: 495 GVP 503
P
Sbjct: 661 TQP 663
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 135 SYCSKCLDHKMFLEKLNAEAKVCVQCKKKSNYDKKIE--PPSAYFKRL-ATVQPP 290
+YCS C ++++F+ K N E+ + S + + + P AY RL A V P
Sbjct: 652 AYCSACEEYQIFMPKYNNESSPEQSSQPGSAHSSQQQKTPEMAYHSRLPAAVSNP 706
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 57 YVMACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCK 215
Y + + C K N+ + K G C++CL F + +A+ VC+ CK
Sbjct: 272 YRHSVDQCFKFINVNNRRKALIMAG--RCTRCLGRHSFKDCRSAKFNVCMYCK 322
>AC024204-4|AAF36039.1| 126|Caenorhabditis elegans Hypothetical
protein Y73B6A.3 protein.
Length = 126
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = +1
Query: 160 TKC-FWRN*MLKQRY----VYNVKKNLIMIKK 240
TKC FW N K++ YN KKNL++I+K
Sbjct: 71 TKCGFWENVKTKKKVEPKTTYNKKKNLLIIQK 102
>Z83123-6|CAD45601.1| 327|Caenorhabditis elegans Hypothetical
protein T04A11.12 protein.
Length = 327
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -3
Query: 399 WKLSCELVLALGSVIVLKSHCLLNLLQHSLYCYHLDL 289
W C + + ++++KS CLLN S++ Y +++
Sbjct: 217 WMTCCIITNFILLLLLIKSRCLLNAQTRSMHSYKVEV 253
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 27.5 bits (58), Expect = 6.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 117 CPGCGFSYCSKCLD 158
CP C FS+C KC +
Sbjct: 306 CPDCFFSFCRKCFE 319
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +3
Query: 63 MACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCKKKSNYD 233
+ C C +N K CG ++C++C+ K + N+ C C+ ++ D
Sbjct: 36 LKCQVCCTNYNETTKLARGLHCGHTFCTECI--KTMQKYGNSAYLECPSCRAETKCD 90
>U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical
protein T20F5.7 protein.
Length = 294
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +3
Query: 42 SLTVIYVMACNTCAKPFNLLRKEKGCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCKKK 221
+ T ++ C C + F+ ++ CG + C +C D+ L NA V V+C
Sbjct: 6 AFTTADLVTCLICIREFDTKTRKPKVLHCGHTVCEECTDN---LRDFNAPLLV-VRCPTC 61
Query: 222 SNYDKK 239
+ K+
Sbjct: 62 RQFTKR 67
>U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical
protein T14B4.1 protein.
Length = 1146
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 138 YCSKCLDHKMFLEKLNAEAKVCVQCKKKSN 227
+ KC DHK+ L+ + A A + + KK N
Sbjct: 591 FIKKCTDHKLALDCIRASASIVNEEKKSLN 620
>U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated
protein 97 protein.
Length = 348
Score = 27.5 bits (58), Expect = 6.2
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Frame = +3
Query: 69 CNTCAKPFNLLR--KEKGCPGCGFSY-------CSKCLDHKMFLEKLNAEAKV-CVQCKK 218
C+ C KPF R + KG P C + C KC D E A K CV+C
Sbjct: 231 CSVCEKPFLGHRHYERKGLPYCEQHFHKLFGNLCFKCGD-PCCGEVFQALQKTWCVKCFS 289
Query: 219 KSNYDKKIEPPSAYFK 266
S DKK++ + +++
Sbjct: 290 CSFCDKKLDQKTKFYE 305
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +3
Query: 156 DHKMFLEKLNAEAKVCVQCKKKSNYDKKIEPPSAYFKRLATVQ---PPDPNDSNTNYAGA 326
+ ++ + +++ K + K S K PP ++ +T PP+P D+ N +
Sbjct: 631 EEEVIVRDIDSPVKTLLSPKILSGGHKPDFPPVPRIQKPSTSSQPPPPEPMDTKENESDD 690
Query: 327 SSKDNEILK 353
+DN+IL+
Sbjct: 691 GEEDNDILE 699
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +3
Query: 156 DHKMFLEKLNAEAKVCVQCKKKSNYDKKIEPPSAYFKRLATVQ---PPDPNDSNTNYAGA 326
+ ++ + +++ K + K S K PP ++ +T PP+P D+ N +
Sbjct: 631 EEEVIVRDIDSPVKTLLSPKILSGGHKPDFPPVPRIQKPSTSSQPPPPEPMDTKENESDD 690
Query: 327 SSKDNEILK 353
+DN+IL+
Sbjct: 691 GEEDNDILE 699
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +3
Query: 156 DHKMFLEKLNAEAKVCVQCKKKSNYDKKIEPPSAYFKRLATVQ---PPDPNDSNTNYAGA 326
+ ++ + +++ K + K S K PP ++ +T PP+P D+ N +
Sbjct: 631 EEEVIVRDIDSPVKTLLSPKILSGGHKPDFPPVPRIQKPSTSSQPPPPEPMDTKENESDD 690
Query: 327 SSKDNEILK 353
+DN+IL+
Sbjct: 691 GEEDNDILE 699
>AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein.
Length = 348
Score = 27.5 bits (58), Expect = 6.2
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Frame = +3
Query: 69 CNTCAKPFNLLR--KEKGCPGCGFSY-------CSKCLDHKMFLEKLNAEAKV-CVQCKK 218
C+ C KPF R + KG P C + C KC D E A K CV+C
Sbjct: 231 CSVCEKPFLGHRHYERKGLPYCEQHFHKLFGNLCFKCGD-PCCGEVFQALQKTWCVKCFS 289
Query: 219 KSNYDKKIEPPSAYFK 266
S DKK++ + +++
Sbjct: 290 CSFCDKKLDQKTKFYE 305
>AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform c protein.
Length = 445
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 270 LATVQPPDPNDSNTNYAGASS 332
L TV PP PNDS + G SS
Sbjct: 20 LETVIPPPPNDSGHEFIGPSS 40
>Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical
protein W09C5.7 protein.
Length = 783
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/71 (19%), Positives = 31/71 (43%)
Frame = +3
Query: 141 CSKCLDHKMFLEKLNAEAKVCVQCKKKSNYDKKIEPPSAYFKRLATVQPPDPNDSNTNYA 320
C CLD ++ + V Q ++ + EPP + + T+ + + +T YA
Sbjct: 410 CIDCLDRTNLVQGQISLFVVLQQAQRLGIFGPLCEPPEVLVQTMQTMWADNGDVISTQYA 469
Query: 321 GASSKDNEILK 353
G ++ ++ +
Sbjct: 470 GTAALKGDVTR 480
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +3
Query: 324 ASSKDNEILKRLQNLKQEQVHKKVSTDDEIAQRLKNIKGDLPSASVSEIEARLAN 488
A+S++ + + L+Q+ + K++S + QRL+ ++ L + S S+ + LAN
Sbjct: 111 ATSRNGDCSFHVAELEQK-LRKEMSLTRKYEQRLQQLESQLKNNSASDSKMELAN 164
>AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical
protein C45G7.4 protein.
Length = 603
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 60 VMACNTCAKPFNLLRKEKGCPGCGFSYCSKCL-DHKMFLEKLNAEAKVCVQCKKKSNYDK 236
++ C C + FN + CG ++C C+ + E ++ C C+++ +
Sbjct: 21 LITCEVCFEVFNHENRPPKLLPCGHNFCESCIFSLCLHQEYYLLDSIKCPTCRREFTTNT 80
Query: 237 KIEPPSAY 260
+ P+ Y
Sbjct: 81 ARQAPTNY 88
>AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical
protein T05H4.9 protein.
Length = 539
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +3
Query: 114 GCPGCGFSYCSKCLDHKMFLEKLNAEAKVCVQCK 215
GC F +C++C ++ F + E +C C+
Sbjct: 496 GCYNLAFIFCARCKEYICFSHFIVDEKHLCPNCR 529
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,576,986
Number of Sequences: 27780
Number of extensions: 231522
Number of successful extensions: 869
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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