Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS322A01f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   3.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   4.4  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 345 SHCLLNLLQHSLYCYHLDLV 286
           SHC+  +L+   +C+H  +V
Sbjct: 12  SHCIQQILESVHHCHHNGVV 31


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 324 ASSKDNEILKRLQNLKQEQVHKKVSTDDEIAQRLKN 431
           A  K+NE+   L  +  E+  +       I Q +KN
Sbjct: 333 AQHKENELYANLMKIVHEKQQEITGLIQNIIQEMKN 368


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 324 ASSKDNEILKRLQNLKQEQVHKKVSTDDEIAQRLKN 431
           A  K+NE+   L  +  E+  +       I Q +KN
Sbjct: 371 AQHKENELYANLMKIVHEKQQEITGLIQNIIQEMKN 406


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 449 WKVTFYIFKPLSNLVIC 399
           W + +  ++P+SNL+ C
Sbjct: 268 WDLKYNTWEPISNLINC 284


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 171 LEKLNAEAKVCVQCKKKSNYDKKIEPPSAY 260
           LE+L  +  +C+  K+K   D  +   +AY
Sbjct: 300 LEELLGKRNICIAIKEKLVKDSGVAKDAAY 329


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,522
Number of Sequences: 438
Number of extensions: 2938
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)