Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321H12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   0.62 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   7.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.7  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   7.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.7  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +2

Query: 257 VEDDESADPRLAKDPAYEMFD--KVDKFLQSHTLRV 358
           +++DES  P+L   P +EM D  K+D  +    +RV
Sbjct: 82  LKNDESESPKLNPYPNWEMNDINKIDSIINIIRVRV 117


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 4   PLPSNKTGTVSNSENGQNNSVVIDRCLRKC 93
           P  S   G     E   N+++ +  C+RKC
Sbjct: 81  PCASKYCGIGKECELSPNSTIAVCVCMRKC 110


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 198 TDDIHCRVLGFTHSTEYWLR 139
           T  +HC V G T  T  WL+
Sbjct: 824 TATLHCEVHGDTPVTVTWLK 843


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 198 TDDIHCRVLGFTHSTEYWLR 139
           T  +HC V G T  T  WL+
Sbjct: 820 TATLHCEVHGDTPVTVTWLK 839


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -2

Query: 352 KSMTLEKLVHFVEHF 308
           +S+T++KL+ + +HF
Sbjct: 451 ESVTVDKLITYFDHF 465


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 266 DESADPRLAKDPAYEMFDKVDK 331
           D+S +  L+  P+++ FDK  K
Sbjct: 41  DDSDEEELSARPSFKTFDKGPK 62


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -2

Query: 352 KSMTLEKLVHFVEHF 308
           +S+T++KL+ + +HF
Sbjct: 451 ESVTVDKLITYFDHF 465


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -2

Query: 352 KSMTLEKLVHFVEHF 308
           +S+T++KL+ + +HF
Sbjct: 77  ESVTVDKLITYFDHF 91


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 231 SSVILISSSLATDDIHCRVLGF 166
           +SVI  ++S  +DD++   LGF
Sbjct: 407 TSVIQAATSSVSDDLYLLELGF 428


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,082
Number of Sequences: 438
Number of extensions: 2883
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)