Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321H11f
         (498 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0046 - 40714701-40714763,40715266-40715343,40716398-407164...    30   1.2  
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435...    29   1.6  
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467...    29   2.1  
05_05_0077 + 22226326-22226441,22226527-22226601,22227619-222277...    28   3.6  

>01_07_0046 -
           40714701-40714763,40715266-40715343,40716398-40716462,
           40717075-40717201,40717279-40717319,40717621-40717690,
           40718070-40718191,40719047-40719107,40719182-40719292,
           40719387-40719461,40719815-40719842,40719929-40719978,
           40720228-40720290,40720385-40720426,40720562-40720631,
           40720663-40720713,40721857-40722041,40722374-40722775
          Length = 567

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 484 LSNARKEIVELKLALQDATSETKSLQDSVNRMSRXESENHEVYI 353
           L  A++E+V     L++A +ETK+L+    RM   + E  EV +
Sbjct: 321 LDCAKEEVVTAMEQLKEAETETKALRSMTQRMILTQEEMEEVVL 364


>04_04_0179 -
           23342764-23342973,23343185-23343340,23343535-23343593,
           23344150-23344226,23344309-23344587,23344800-23344885,
           23344960-23345027,23345721-23345904,23346071-23346204,
           23346776-23347039,23347613-23347677,23347833-23348407,
           23348501-23348680,23348765-23348928,23349008-23349261,
           23349405-23349562,23349808-23349948,23350176-23350282,
           23350651-23350737,23350812-23350901,23350974-23351055,
           23351370-23351561,23351748-23351816,23351959-23352294,
           23352694-23352837,23352963-23353126,23353817-23353883
          Length = 1463

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -3

Query: 484 LSNARKEIVELKLALQDATSETKSLQDSVNRMS 386
           + + ++EI +LKLAL D   E   L+D  NR++
Sbjct: 679 VKDLKEEISKLKLALDDKEREASKLRDIANRVA 711


>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
            29646843-29646899,29647007-29647094,29647304-29647374,
            29647457-29647585,29647662-29648051,29648332-29648517,
            29648612-29648692,29648787-29648879,29648966-29649086,
            29649200-29649409,29649560-29649727,29649898-29650065,
            29650144-29650311,29650453-29650620,29650738-29650905,
            29651023-29651190,29651567-29651734,29652391-29652558,
            29652645-29652812,29655720-29655887,29656069-29656236,
            29656391-29656558,29656670-29656837,29657525-29657664,
            29658033-29658221,29658243-29658315,29658379-29658452,
            29658535-29658654,29658718-29658738,29658794-29658999,
            29659094-29659271,29660066-29660126,29660232-29660341,
            29660427-29660558,29661091-29661258,29661339-29661465,
            29661794-29661831,29663321-29663422,29663505-29663562,
            29663659-29663760,29663844-29663990,29664098-29664234,
            29664313-29664462,29664561-29664720,29665820-29665878,
            29666025-29666181,29666288-29666433,29666523-29666666,
            29667242-29667376
          Length = 2344

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -3

Query: 484  LSNARKEIVELKLALQDATSETKSLQDSVNRM 389
            L++A+ EI EL+  L+DA      LQDS+ R+
Sbjct: 1239 LADAQVEIGELQRNLEDADRRNNQLQDSLQRL 1270



 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -3

Query: 496  TXRLLSNARKEIVELKLALQDATSETKSLQDSVNRM 389
            T +LL+ A  EI EL   L+D+  ++ SLQ ++ R+
Sbjct: 1515 TLKLLAEAHLEIDELIRKLEDSDRKSDSLQSTIKRL 1550


>05_05_0077 +
           22226326-22226441,22226527-22226601,22227619-22227781,
           22227867-22228166
          Length = 217

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -3

Query: 487 LLSNARKEIVELKLALQDATSETKSLQDSVNRMSRXESE 371
           +LS+A + + +L+   Q   S  +SLQDS+  +   +SE
Sbjct: 85  ILSDAARLLSQLRAEAQKLKSSNESLQDSIKSLKAEKSE 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,753,447
Number of Sequences: 37544
Number of extensions: 80444
Number of successful extensions: 175
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)