Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321H11f
(498 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002932-1|AAH02932.1| 850|Homo sapiens CEP110 protein protein. 30 5.1
AY651261-1|AAX35689.1| 1244|Homo sapiens centrosomal protein 1 p... 30 5.1
AL137068-5|CAI12358.1| 1773|Homo sapiens centrosomal protein 110... 30 5.1
AL137068-4|CAI12357.1| 994|Homo sapiens centrosomal protein 110... 30 5.1
AL137068-3|CAI12356.1| 828|Homo sapiens centrosomal protein 110... 30 5.1
AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110... 30 5.1
AK128098-1|BAC87273.1| 1185|Homo sapiens protein ( Homo sapiens ... 30 5.1
AK074079-1|BAB84905.1| 1793|Homo sapiens FLJ00150 protein protein. 30 5.1
AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein. 30 5.1
AB014535-1|BAA31610.2| 864|Homo sapiens KIAA0635 protein protein. 29 9.0
>BC002932-1|AAH02932.1| 850|Homo sapiens CEP110 protein protein.
Length = 850
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 478 NARKEIVELKLALQDATSETKSLQDSVNRMSRXESE 371
N RKE+ EL+ ALQ+ SLQ + +S E+E
Sbjct: 5 NMRKELAELESALQEQHEVNASLQQTQGDLSAYEAE 40
>AY651261-1|AAX35689.1| 1244|Homo sapiens centrosomal protein 1
protein.
Length = 1244
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 478 NARKEIVELKLALQDATSETKSLQDSVNRMSRXESE 371
N RKE+ EL+ ALQ+ SLQ + +S E+E
Sbjct: 239 NMRKELAELESALQEQHEVNASLQQTQGDLSAYEAE 274
>AL137068-5|CAI12358.1| 1773|Homo sapiens centrosomal protein 110kDa
protein.
Length = 1773
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 478 NARKEIVELKLALQDATSETKSLQDSVNRMSRXESE 371
N RKE+ EL+ ALQ+ SLQ + +S E+E
Sbjct: 120 NMRKELAELESALQEQHEVNASLQQTQGDLSAYEAE 155
>AL137068-4|CAI12357.1| 994|Homo sapiens centrosomal protein 110kDa
protein.
Length = 994
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 478 NARKEIVELKLALQDATSETKSLQDSVNRMSRXESE 371
N RKE+ EL+ ALQ+ SLQ + +S E+E
Sbjct: 120 NMRKELAELESALQEQHEVNASLQQTQGDLSAYEAE 155
>AL137068-3|CAI12356.1| 828|Homo sapiens centrosomal protein 110kDa
protein.
Length = 828
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 478 NARKEIVELKLALQDATSETKSLQDSVNRMSRXESE 371
N RKE+ EL+ ALQ+ SLQ + +S E+E
Sbjct: 154 NMRKELAELESALQEQHEVNASLQQTQGDLSAYEAE 189
>AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110kDa
protein.
Length = 2325
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 478 NARKEIVELKLALQDATSETKSLQDSVNRMSRXESE 371
N RKE+ EL+ ALQ+ SLQ + +S E+E
Sbjct: 672 NMRKELAELESALQEQHEVNASLQQTQGDLSAYEAE 707
>AK128098-1|BAC87273.1| 1185|Homo sapiens protein ( Homo sapiens
cDNA FLJ46219 fis, clone TESTI4013742, moderately
similar to Mus musculus antigen identified by monoclonal
antibody ).
Length = 1185
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 478 NARKEIVELKLALQDATSETKSLQDSVNRMSRXESE 371
N RKE+ EL+ ALQ+ SLQ + +S E+E
Sbjct: 505 NMRKELAELESALQEQHEVNASLQQTQGDLSAYEAE 540
>AK074079-1|BAB84905.1| 1793|Homo sapiens FLJ00150 protein protein.
Length = 1793
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 478 NARKEIVELKLALQDATSETKSLQDSVNRMSRXESE 371
N RKE+ EL+ ALQ+ SLQ + +S E+E
Sbjct: 146 NMRKELAELESALQEQHEVNASLQQTQGDLSAYEAE 181
>AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein.
Length = 2325
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 478 NARKEIVELKLALQDATSETKSLQDSVNRMSRXESE 371
N RKE+ EL+ ALQ+ SLQ + +S E+E
Sbjct: 672 NMRKELAELESALQEQHEVNASLQQTQGDLSAYEAE 707
>AB014535-1|BAA31610.2| 864|Homo sapiens KIAA0635 protein protein.
Length = 864
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -3
Query: 490 RLLSNARKEIVELKLALQDATSETKSLQDSVNRMSRXESENHEVYIDTDSSI 335
R L A KE+ E+ + + A E + LQD + M+R EN E+ ++ ++++
Sbjct: 521 RQLDAAHKELDEVGRSREIAFKENRRLQDDLATMAR---ENQEISLELEAAV 569
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,134,976
Number of Sequences: 237096
Number of extensions: 515214
Number of successful extensions: 1198
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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