Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321H06f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23412-4|AAK21468.3|  697|Caenorhabditis elegans Ubiquitin-like ...    29   2.0  
AB095020-1|BAC22612.1|  697|Caenorhabditis elegans similar to SU...    29   2.0  
U29613-3|AAC47062.2|  483|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z81528-2|CAB04283.1|  271|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U23412-4|AAK21468.3|  697|Caenorhabditis elegans Ubiquitin-like
           protease protein 1 protein.
          Length = 697

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 99  IQFYIELVCARSFGSPKIQELHLYN 25
           I FY++L+C RS G  K  +++ +N
Sbjct: 522 INFYLQLICDRSNGDSKYPKIYAFN 546


>AB095020-1|BAC22612.1|  697|Caenorhabditis elegans similar to
           SUMO-1-specific protease protein.
          Length = 697

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 99  IQFYIELVCARSFGSPKIQELHLYN 25
           I FY++L+C RS G  K  +++ +N
Sbjct: 522 INFYLQLICDRSNGDSKYPKIYAFN 546


>U29613-3|AAC47062.2|  483|Caenorhabditis elegans Hypothetical
           protein K02A6.3a protein.
          Length = 483

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 390 LINKKTSAWSTDDAEPPNNSFNL 322
           LI   TS+W T + EP +N FNL
Sbjct: 80  LITNTTSSWRTLNVEPVSNIFNL 102


>Z81528-2|CAB04283.1|  271|Caenorhabditis elegans Hypothetical
           protein F35E2.2 protein.
          Length = 271

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 278 DVKETSPTIELFCKVKLKELFGGSASSVLQADVFLLIKYSTETRLERAR 424
           D+ ET P  E+F  +K++E+   +A+   Q    +L  + T +RL++ R
Sbjct: 162 DMSETQPVTEVFALLKIQEVVLQNAAISSQMLNKVLKAWKTTSRLKKFR 210


>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical
           protein F26H9.8 protein.
          Length = 1377

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 460 YKALTLILQPTRAGALQPRLRTILN 386
           YK+L L+LQP   G ++P  R I N
Sbjct: 441 YKSLMLMLQPFPPGQIRPISRNIFN 465


>Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical
           protein F26H9.8 protein.
          Length = 1377

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 460 YKALTLILQPTRAGALQPRLRTILN 386
           YK+L L+LQP   G ++P  R I N
Sbjct: 441 YKSLMLMLQPFPPGQIRPISRNIFN 465


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,420,057
Number of Sequences: 27780
Number of extensions: 211684
Number of successful extensions: 463
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)