Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321H06f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    26   0.20 
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    25   0.47 
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   1.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   5.8  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   7.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   7.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.7  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = -3

Query: 117 LLRLLQIQFYIELV-----CARSFGSPKIQELHLYNQTSAS 10
           +L+L Q+  Y E V     C  +FGS K  ELH+   + +S
Sbjct: 246 VLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHSDSS 286


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 104 YKYNFTS--N*SVHGASGLLKFKNYIFTIRHLP 12
           YKYN+ +  N + +  +  L +KNYI  I  +P
Sbjct: 96  YKYNYNNKYNYNNNNYNKKLYYKNYIINIEQIP 128


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 98  YNFTSN*SVHGASGLLKFKNYIFTIRHLP 12
           YN  +N + +  +  L +KNYI  I  +P
Sbjct: 330 YNNYNNNNYNNYNKKLYYKNYIINIEQIP 358


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 168 WNSNHSKKNRNLE 130
           WN N   K RN+E
Sbjct: 327 WNENRPLKRRNIE 339


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 348 EP-PNNSFNLTLQNNSIVGDVSLTSLCAS 265
           EP P+  FN+TL+  ++   V+L   C S
Sbjct: 220 EPYPDIFFNITLRRKTLFYTVNLIVPCVS 248


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 168 WNSNHSKKNRNLEKIKFLLRLLQI 97
           WN + S + +NLE +    R LQ+
Sbjct: 328 WNEHQSLQRQNLEMVAQNDRTLQM 351


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 508 QFDISQND*VCLPTHTY 458
           Q+D+ +N  VCLP   Y
Sbjct: 429 QYDLKKNLKVCLPPGQY 445


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,101
Number of Sequences: 438
Number of extensions: 2475
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)