Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321H04f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0156 - 14532000-14532098,14532669-14534330,14534445-145346...    31   0.56 
01_06_1528 + 38011391-38011635,38012366-38012566,38012659-380128...    30   1.3  
06_01_0637 + 4635136-4635969                                           29   2.3  
04_04_0694 - 27311910-27312056,27314277-27314420,27315085-273151...    28   5.2  
02_05_0879 - 32444967-32445250,32445643-32445674,32445752-324458...    28   5.2  
09_03_0153 - 12814596-12815645                                         27   9.1  

>12_02_0156 -
           14532000-14532098,14532669-14534330,14534445-14534660,
           14534730-14534907,14535065-14535276
          Length = 788

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
 Frame = -3

Query: 279 LCRLLQ*SEAGPANAVIIWYL---ENPNV-----LFVRIVGGVFAGASLADQCRSQPLTH 124
           LC +   + AGP    I  YL   + PN+     L V+I+G + A +S  D  +  PL H
Sbjct: 165 LCVVFAPTAAGPGIPEIKAYLNGVDTPNMFGAPQLIVKIIGSICAVSSGLDLGKEGPLVH 224

Query: 123 APACVTRQLA 94
             AC+   L+
Sbjct: 225 IGACLANLLS 234


>01_06_1528 +
           38011391-38011635,38012366-38012566,38012659-38012836,
           38012946-38013208,38013380-38013649,38013753-38014950
          Length = 784

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 210 PNVLFVRIVGGVFAGASLADQCRSQPLTHAPACV 109
           P+ LFV+IVG +F  ++     +  P+ H  ACV
Sbjct: 202 PSTLFVKIVGSIFGVSAGFVLGKEGPMVHTGACV 235


>06_01_0637 + 4635136-4635969
          Length = 277

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 326 DGPLEMPLPDGPLVGPSVGCCSEARPVRR 240
           DGP E P    P     VGCC +  P +R
Sbjct: 229 DGPPEAPATASPEFRSFVGCCLQMNPAKR 257


>04_04_0694 -
           27311910-27312056,27314277-27314420,27315085-27315108,
           27315570-27315713,27316372-27316423,27316534-27316599,
           27316724-27316955,27316970-27317081
          Length = 306

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -1

Query: 341 DWPLLDGPLEMPLPDGPLVGPSVGCCSEARPVRRTLLLFGI 219
           DW L     + P    PLVGP   C   A   +RTL L G+
Sbjct: 90  DWNLRSYRFKSPFDRRPLVGPRERCRKNA--AKRTLRLVGL 128


>02_05_0879 -
           32444967-32445250,32445643-32445674,32445752-32445809,
           32445840-32445913,32446004-32446088,32447054-32447735
          Length = 404

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 249 GPANAVIIWYLENPNVLFVRIVGGVFAGASLADQCRS 139
           G   +V + Y   P      +  GVFAG + ADQ R+
Sbjct: 105 GVRKSVSVRYAARPADTLATVADGVFAGLAFADQIRN 141


>09_03_0153 - 12814596-12815645
          Length = 349

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -3

Query: 246 PANAVIIWYLENPNVLFVRIVGGVFAGASLADQCRSQPLTHAPACVTRQL 97
           P   V+++ LE+P +LF R+ G  ++       C   P  + P    RQL
Sbjct: 117 PGCGVLVFDLESPALLFCRVGGERWSRHGYDIGCYDLPEEYCPVPKRRQL 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,294,407
Number of Sequences: 37544
Number of extensions: 179549
Number of successful extensions: 436
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)