Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321H03f
(379 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457016-1|CAG33297.1| 99|Homo sapiens CD14 protein. 102 3e-22
BC003674-1|AAH03674.1| 99|Homo sapiens NADH dehydrogenase (ubi... 102 3e-22
AF047185-1|AAC04270.1| 99|Homo sapiens NADH-ubiquinone oxidore... 102 3e-22
AB054976-1|BAB21453.1| 99|Homo sapiens NADH dehydrogenase (ubi... 102 3e-22
BC053373-1|AAH53373.1| 202|Homo sapiens mitochondrial ribosomal... 37 0.019
BC052639-1|AAH52639.1| 164|Homo sapiens MRPL43 protein protein. 37 0.019
BC041165-1|AAH41165.1| 215|Homo sapiens mitochondrial ribosomal... 37 0.019
BC015905-1|AAH15905.1| 159|Homo sapiens mitochondrial ribosomal... 37 0.019
AL133215-9|CAI10923.1| 159|Homo sapiens mitochondrial ribosomal... 37 0.019
AL133215-8|CAI10922.1| 164|Homo sapiens mitochondrial ribosomal... 37 0.019
AL133215-7|CAI10921.1| 168|Homo sapiens mitochondrial ribosomal... 37 0.019
AL133215-6|CAI10920.1| 202|Homo sapiens mitochondrial ribosomal... 37 0.019
AL133215-5|CAI10919.1| 215|Homo sapiens mitochondrial ribosomal... 37 0.019
AL133215-4|CAI10918.1| 261|Homo sapiens mitochondrial ribosomal... 37 0.019
AL133215-3|CAI10917.1| 184|Homo sapiens mitochondrial ribosomal... 37 0.019
AK095556-1|BAC04572.1| 215|Homo sapiens protein ( Homo sapiens ... 37 0.019
AB049656-1|BAB40861.1| 197|Homo sapiens mitochondrial ribosomal... 37 0.019
BC031287-1|AAH31287.1| 145|Homo sapiens MRPL43 protein protein. 31 1.2
>CR457016-1|CAG33297.1| 99|Homo sapiens CD14 protein.
Length = 99
Score = 102 bits (245), Expect = 3e-22
Identities = 44/77 (57%), Positives = 58/77 (75%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+E+RIHLCQ S S+GVR+FI+ YV +KK NP+ PILIRECS +QP++WARY G E
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQET 75
Query: 241 STPLTNLSANDVLSAIK 291
+ PL N SA+ V A++
Sbjct: 76 NVPLNNFSADQVTRALE 92
>BC003674-1|AAH03674.1| 99|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 2, 8kDa protein.
Length = 99
Score = 102 bits (245), Expect = 3e-22
Identities = 44/77 (57%), Positives = 58/77 (75%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+E+RIHLCQ S S+GVR+FI+ YV +KK NP+ PILIRECS +QP++WARY G E
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQET 75
Query: 241 STPLTNLSANDVLSAIK 291
+ PL N SA+ V A++
Sbjct: 76 NVPLNNFSADQVTRALE 92
>AF047185-1|AAC04270.1| 99|Homo sapiens NADH-ubiquinone
oxidoreductase subunit CI-B8 protein.
Length = 99
Score = 102 bits (245), Expect = 3e-22
Identities = 44/77 (57%), Positives = 58/77 (75%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+E+RIHLCQ S S+GVR+FI+ YV +KK NP+ PILIRECS +QP++WARY G E
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQET 75
Query: 241 STPLTNLSANDVLSAIK 291
+ PL N SA+ V A++
Sbjct: 76 NVPLNNFSADQVTRALE 92
>AB054976-1|BAB21453.1| 99|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex 2 protein.
Length = 99
Score = 102 bits (245), Expect = 3e-22
Identities = 44/77 (57%), Positives = 58/77 (75%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+E+RIHLCQ S S+GVR+FI+ YV +KK NP+ PILIRECS +QP++WARY G E
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQET 75
Query: 241 STPLTNLSANDVLSAIK 291
+ PL N SA+ V A++
Sbjct: 76 NVPLNNFSADQVTRALE 92
>BC053373-1|AAH53373.1| 202|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 202
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>BC052639-1|AAH52639.1| 164|Homo sapiens MRPL43 protein protein.
Length = 164
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>BC041165-1|AAH41165.1| 215|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>BC015905-1|AAH15905.1| 159|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 159
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>AL133215-9|CAI10923.1| 159|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 159
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>AL133215-8|CAI10922.1| 164|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 164
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>AL133215-7|CAI10921.1| 168|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 168
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 22 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 81
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 82 EESIHCKSVEEISTLVQK 99
>AL133215-6|CAI10920.1| 202|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 202
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>AL133215-5|CAI10919.1| 215|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>AL133215-4|CAI10918.1| 261|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 261
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>AL133215-3|CAI10917.1| 184|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 184
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>AK095556-1|BAC04572.1| 215|Homo sapiens protein ( Homo sapiens
cDNA FLJ38237 fis, clone FCBBF2005637. ).
Length = 215
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>AB049656-1|BAB40861.1| 197|Homo sapiens mitochondrial ribosomal
protein bMRP36a protein.
Length = 197
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 61 LKELRIHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEK 240
L+ L + + S G REF++ ++ + NP I + PRV A Y GA +
Sbjct: 26 LQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVR 85
Query: 241 STPLTNLSANDVLSAIKQ 294
+ S ++ + +++
Sbjct: 86 EESIHCKSVEEISTLVQK 103
>BC031287-1|AAH31287.1| 145|Homo sapiens MRPL43 protein protein.
Length = 145
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +1
Query: 112 VREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLSAIK 291
+REF++ ++ + NP I + PRV A Y GA + + S ++ + ++
Sbjct: 29 LREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYINGAVREESIHCKSVEEISTLVQ 88
Query: 292 Q 294
+
Sbjct: 89 K 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,609,456
Number of Sequences: 237096
Number of extensions: 811621
Number of successful extensions: 1486
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1486
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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