Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321G10f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0674 + 5162291-5162376,5162530-5162560,5162689-5163207,516...    31   0.42 
03_02_0985 - 12961787-12961984,12963177-12963337,12965332-129654...    28   5.2  
07_03_1408 - 26353389-26355191                                         27   6.9  
03_04_0020 - 16504322-16504654,16504758-16504785,16504937-165049...    27   6.9  
03_03_0094 + 14378953-14380728                                         27   6.9  
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130...    27   9.1  
04_04_1536 - 34207425-34207490,34207801-34208268,34208345-342084...    27   9.1  
02_01_0510 + 3703715-3705040                                           27   9.1  

>01_01_0674 +
           5162291-5162376,5162530-5162560,5162689-5163207,
           5165561-5166010,5166050-5166134,5167374-5167399
          Length = 398

 Score = 31.5 bits (68), Expect = 0.42
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
 Frame = +2

Query: 236 RRGP-PGV-NSRSLSSAHSA-ADLEILREIENVYFSSPVDFDAARYVLEHAPAPPTCESI 406
           RR P PG    R   +A S  A++ +       Y+       AA    E APAPP+   +
Sbjct: 127 RRPPKPGACGQRMFKTAMSVLANMHVAATYRRQYYYQQA---AAAAAAEAAPAPPSDNQL 183

Query: 407 EHMFTKLKRQQQV 445
           +HM ++ KR++++
Sbjct: 184 QHMISERKRREKL 196


>03_02_0985 -
           12961787-12961984,12963177-12963337,12965332-12965489,
           12966015-12966105,12966715-12966752,12966994-12967154,
           12967249-12968687,12968815-12969227,12969630-12970987,
           12971089-12971454,12971533-12971696,12971748-12971820,
           12972967-12973113
          Length = 1588

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -3

Query: 480 CCDI--KWRAFPETTCCCLLSFVNICSMDSQVGGAGAC 373
           CCD+  KWR  P  T   +L    ICSM   + G   C
Sbjct: 672 CCDMCHKWRLLPYGTNTSMLPKKWICSMLDWLPGMNKC 709


>07_03_1408 - 26353389-26355191
          Length = 600

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 409 AYVHEAQEAATGGLWKSPPFDIATARQLR 495
           A V  A EA TG +++ PP   A  RQLR
Sbjct: 181 ARVARALEALTGAVFQRPPLISAVKRQLR 209


>03_04_0020 -
           16504322-16504654,16504758-16504785,16504937-16504989,
           16505377-16505463,16505636-16505704,16506071-16506145,
           16507040-16507210,16507693-16507793,16508062-16508139,
           16508492-16508648,16508737-16509006,16509369-16509485,
           16510250-16510339,16510417-16510629,16510742-16510891,
           16511929-16512342
          Length = 801

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 447 TTCCCLLSFVNICS 406
           T CCC + F+N CS
Sbjct: 754 TDCCCCMCFINTCS 767


>03_03_0094 + 14378953-14380728
          Length = 591

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 409 AYVHEAQEAATGGLWKSPPFDIATARQLR 495
           A V  A EA TG +++ PP   A  RQLR
Sbjct: 185 ARVARALEALTGAVFQRPPLISAVKRQLR 213


>08_02_1318 -
           26111031-26111276,26112139-26112427,26112936-26113036,
           26113628-26113878,26114842-26114865,26115793-26116129
          Length = 415

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 498 LSQLSRCCDIKWRAFPETTCCCLLSFVNICSMDS 397
           L +L+RC  + W+A  +TT   +L   N C +D+
Sbjct: 108 LQELNRCMTLIWKAHSDTTVAKML-VGNKCDLDN 140


>04_04_1536 -
           34207425-34207490,34207801-34208268,34208345-34208485,
           34208582-34208820,34209950-34210436
          Length = 466

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 477 CDIKWRAFPETTCCCLLSFVNIC 409
           CD  +     +TCCC   F N+C
Sbjct: 386 CDDNFSCPAGSTCCCAFGFRNLC 408


>02_01_0510 + 3703715-3705040
          Length = 441

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 249 GGPRRFSTTSLDSMLQDLSY 190
           GGP+R+ T   D+ LQ+LSY
Sbjct: 414 GGPQRWMTDMSDTSLQNLSY 433


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,141,978
Number of Sequences: 37544
Number of extensions: 210031
Number of successful extensions: 569
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)