Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321G10f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052145-1|AAK93569.1|  966|Drosophila melanogaster SD10481p pro...    38   0.008
AE013599-2549|AAF57801.1|  966|Drosophila melanogaster CG4996-PA...    38   0.008
M17214-1|AAA28507.1|  122|Drosophila melanogaster protein ( D.me...    29   3.8  
AY089499-1|AAL90237.1|  738|Drosophila melanogaster GH09982p pro...    28   6.7  
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD...    28   6.7  

>AY052145-1|AAK93569.1|  966|Drosophila melanogaster SD10481p
           protein.
          Length = 966

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +2

Query: 260 SRSLSSAHSAADLEILREIENVYFSSPVDFDAARYVLEHAPAPPTC-ESIEHMFTKLKRQ 436
           S S S+A  + D EIL  IE  Y++   D +   Y L+         E IE    +L+ Q
Sbjct: 61  SSSESNAQKS-DQEILESIEQCYYNP--DSNPQLYELKKVLNDGIDNELIEVTIAQLRTQ 117

Query: 437 QQVVSGKALHLISQQRDNCDKEFAEIQN 520
           Q+V++ + L  I +QR+ C  EFA I +
Sbjct: 118 QKVLTKQVLQNILEQRNACSSEFAAIND 145


>AE013599-2549|AAF57801.1|  966|Drosophila melanogaster CG4996-PA
           protein.
          Length = 966

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +2

Query: 260 SRSLSSAHSAADLEILREIENVYFSSPVDFDAARYVLEHAPAPPTC-ESIEHMFTKLKRQ 436
           S S S+A  + D EIL  IE  Y++   D +   Y L+         E IE    +L+ Q
Sbjct: 61  SSSESNAQKS-DQEILESIEQCYYNP--DSNPQLYELKKVLNDGIDNELIEVTIAQLRTQ 117

Query: 437 QQVVSGKALHLISQQRDNCDKEFAEIQN 520
           Q+V++ + L  I +QR+ C  EFA I +
Sbjct: 118 QKVLTKQVLQNILEQRNACSSEFAAIND 145


>M17214-1|AAA28507.1|  122|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 122

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
 Frame = +2

Query: 74  QCFSQRSYN*LK-YLV*AVTCIVCATHXXXXXXXINNQNK*LRSCNMLSNDVVENRRGPP 250
           QC + + Y   + Y   A  C+VC          IN +N   + CN    +   N RG P
Sbjct: 39  QCTNCQEYGHTRSYCTLAPVCVVCGDLHDSKQCQINKENACEKKCNNCGGNHTANYRGCP 98


>AY089499-1|AAL90237.1|  738|Drosophila melanogaster GH09982p
           protein.
          Length = 738

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +2

Query: 317 ENVYFSSPVDFDAARYVLE--HAPAPPTCESIEHMFTKLKRQQQVVSGKALH-LISQQRD 487
           E+VYF++    D A+      H    P   S+E +   L   Q+V S +ALH ++    D
Sbjct: 564 ESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNS-EALHQMLPMLND 622

Query: 488 NCDKEFA 508
            C+KE A
Sbjct: 623 VCEKESA 629


>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
            protein.
          Length = 2351

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +2

Query: 317  ENVYFSSPVDFDAARYVLE--HAPAPPTCESIEHMFTKLKRQQQVVSGKALH-LISQQRD 487
            E+VYF++    D A+      H    P   S+E +   L   Q+V S +ALH ++    D
Sbjct: 2177 ESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNS-EALHQMLPMLND 2235

Query: 488  NCDKEFA 508
             C+KE A
Sbjct: 2236 VCEKESA 2242


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,448,882
Number of Sequences: 53049
Number of extensions: 357831
Number of successful extensions: 1144
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)