Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321G10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73424-4|CAA97778.2|  954|Caenorhabditis elegans Hypothetical pr...    35   0.041
Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z73424-4|CAA97778.2|  954|Caenorhabditis elegans Hypothetical
           protein C44B9.1 protein.
          Length = 954

 Score = 34.7 bits (76), Expect = 0.041
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +2

Query: 263 RSLSSAHSAADLEILREIENVYFSSPVDFDAARYVLEHAPAPPTC-ESIEHMFTKLKRQQ 439
           R + S  S  D +++  I+  YF    +FDA  Y L+       C E I+    +LK Q 
Sbjct: 63  RRVKSKISEED-DVINSIDAAYFIDNDEFDAIDYELKKLCDIEMCYEDIQRERFRLKSQH 121

Query: 440 QVVSGKALHLISQQRDNCDKEFAEIQ 517
            VVS K   LI Q+  +   +  E++
Sbjct: 122 TVVSKKISTLIMQKSSSYTAQVGEME 147


>Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical
           protein K01G5.5 protein.
          Length = 445

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 415 VHEAQEAATGGLWKSPPFDIATARQLR 495
           V +A E  TG L++ PP   A  RQLR
Sbjct: 157 VKQALEKLTGALFQRPPLISAVKRQLR 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,402,325
Number of Sequences: 27780
Number of extensions: 181292
Number of successful extensions: 442
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)