BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321G03f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030439-1|ABO52859.1| 590|Drosophila melanogaster LD10347p pro... 29 2.9
BT011462-1|AAR99120.1| 590|Drosophila melanogaster RE29555p pro... 29 2.9
AY061157-1|AAL28705.1| 383|Drosophila melanogaster LD12501p pro... 29 2.9
AE014297-3662|AAF56358.1| 590|Drosophila melanogaster CG11089-P... 29 2.9
AY094655-1|AAM11008.1| 370|Drosophila melanogaster AT18937p pro... 29 5.1
AE014134-1423|AAF52615.3| 367|Drosophila melanogaster CG8455-PA... 29 5.1
AE014134-1422|AAN11155.1| 370|Drosophila melanogaster CG8455-PB... 29 5.1
>BT030439-1|ABO52859.1| 590|Drosophila melanogaster LD10347p
protein.
Length = 590
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 1 IALAHTNLRLFHH 39
I +AHTNLRLFHH
Sbjct: 578 IIMAHTNLRLFHH 590
>BT011462-1|AAR99120.1| 590|Drosophila melanogaster RE29555p
protein.
Length = 590
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 1 IALAHTNLRLFHH 39
I +AHTNLRLFHH
Sbjct: 578 IIMAHTNLRLFHH 590
>AY061157-1|AAL28705.1| 383|Drosophila melanogaster LD12501p
protein.
Length = 383
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 1 IALAHTNLRLFHH 39
I +AHTNLRLFHH
Sbjct: 371 IIMAHTNLRLFHH 383
>AE014297-3662|AAF56358.1| 590|Drosophila melanogaster CG11089-PA
protein.
Length = 590
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 1 IALAHTNLRLFHH 39
I +AHTNLRLFHH
Sbjct: 578 IIMAHTNLRLFHH 590
>AY094655-1|AAM11008.1| 370|Drosophila melanogaster AT18937p
protein.
Length = 370
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 413 CSAALLCAAKFCEYIIMFILKEK 345
C +LCA FCEY+ F++ +K
Sbjct: 7 CFVIVLCALIFCEYVADFVVLQK 29
>AE014134-1423|AAF52615.3| 367|Drosophila melanogaster CG8455-PA,
isoform A protein.
Length = 367
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 413 CSAALLCAAKFCEYIIMFILKEK 345
C +LCA FCEY+ F++ +K
Sbjct: 7 CFVIVLCALIFCEYVADFVVLQK 29
>AE014134-1422|AAN11155.1| 370|Drosophila melanogaster CG8455-PB,
isoform B protein.
Length = 370
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 413 CSAALLCAAKFCEYIIMFILKEK 345
C +LCA FCEY+ F++ +K
Sbjct: 7 CFVIVLCALIFCEYVADFVVLQK 29
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,907,523
Number of Sequences: 53049
Number of extensions: 390420
Number of successful extensions: 624
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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