Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321G03f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z93379-2|CAB07592.1|  170|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U49941-4|AAP46282.1|  271|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U49941-3|AAP46281.1|  451|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U49941-2|AAB53873.1|  757|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U28944-9|AAL02438.1|  122|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical
           protein ZK512.2 protein.
          Length = 578

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -3

Query: 312 KKIIVYFRLFRILKFFDKLFMQCVGK 235
           KKI+++F     +++F K+F +C+GK
Sbjct: 258 KKILIFFPSCNSVRYFYKIFERCLGK 283


>Z93379-2|CAB07592.1|  170|Caenorhabditis elegans Hypothetical
           protein F21H7.3 protein.
          Length = 170

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -2

Query: 124 VFFSVT-FCHLSSITNSII*IGAINNFCIN 38
           V FSV+ FC ++SIT  +  IG I  FC+N
Sbjct: 123 VLFSVSGFCIIASITYIVSLIGTIYIFCMN 152


>U49941-4|AAP46282.1|  271|Caenorhabditis elegans Hypothetical
           protein K10B3.6c protein.
          Length = 271

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -3

Query: 351 RKKITHEYILNPQKKIIVYFRLF-RILKFFDKLF 253
           + +IT  +ILN +K+ +VYFR+    LKFF K +
Sbjct: 219 KTQITDGWILN-EKESVVYFRIHGEALKFFAKSY 251


>U49941-3|AAP46281.1|  451|Caenorhabditis elegans Hypothetical
           protein K10B3.6b protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -3

Query: 351 RKKITHEYILNPQKKIIVYFRLF-RILKFFDKLF 253
           + +IT  +ILN +K+ +VYFR+    LKFF K +
Sbjct: 219 KTQITDGWILN-EKESVVYFRIHGEALKFFAKSY 251


>U49941-2|AAB53873.1|  757|Caenorhabditis elegans Hypothetical
           protein K10B3.6a protein.
          Length = 757

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -3

Query: 351 RKKITHEYILNPQKKIIVYFRLF-RILKFFDKLF 253
           + +IT  +ILN +K+ +VYFR+    LKFF K +
Sbjct: 219 KTQITDGWILN-EKESVVYFRIHGEALKFFAKSY 251


>U28944-9|AAL02438.1|  122|Caenorhabditis elegans Hypothetical
           protein C18A3.9 protein.
          Length = 122

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 235 VNNFYLFFLYAANVSLNMCRN 173
           VNNF++F  Y   V +N+C N
Sbjct: 83  VNNFFVFMYYIFLVLVNVCNN 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,553,903
Number of Sequences: 27780
Number of extensions: 234374
Number of successful extensions: 537
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)