Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321G02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    24   1.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   7.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.7  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 442 FVVIFRVFQLHF*FYIVIPC 383
           FVVI R   L++ F +++PC
Sbjct: 223 FVVIIRRRTLYYFFNLIVPC 242


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 481 YYQSFKVHQDP 513
           YY S+K+HQ P
Sbjct: 428 YYHSYKMHQKP 438


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 481 YYQSFKVHQDP 513
           YY S+K+HQ P
Sbjct: 428 YYHSYKMHQKP 438


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 295 SSWEPEQFQMCLNGW 339
           SS  PEQF++ ++ W
Sbjct: 329 SSSTPEQFKVIIDNW 343


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 334 GWSWPESIP 360
           GWSW E +P
Sbjct: 179 GWSWDEVMP 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,708
Number of Sequences: 438
Number of extensions: 3061
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)