Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321F09f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ363529-1|ABC88012.1| 1099|Homo sapiens low-voltage-activated c... 30 5.7
DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated c... 30 5.7
DQ363527-1|ABC88010.1| 1088|Homo sapiens low-voltage-activated c... 30 5.7
DQ363526-1|ABC88009.1| 1077|Homo sapiens low-voltage-activated c... 30 5.7
AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel, voltag... 30 5.7
AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated c... 30 5.7
AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated c... 30 5.7
AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel ... 30 5.7
AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-typ... 30 5.7
AK000838-1|BAA91395.1| 140|Homo sapiens protein ( Homo sapiens ... 29 7.5
>DQ363529-1|ABC88012.1| 1099|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 577
protein.
Length = 1099
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 161 PQSLLRVSCSTTINKTLCEHLCSVFIF*N 247
PQ+ RVSC I + +H+ VFIF N
Sbjct: 20 PQNRFRVSCQKVITHKMFDHVVLVFIFLN 48
>DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 544
protein.
Length = 1083
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 161 PQSLLRVSCSTTINKTLCEHLCSVFIF*N 247
PQ+ RVSC I + +H+ VFIF N
Sbjct: 20 PQNRFRVSCQKVITHKMFDHVVLVFIFLN 48
>DQ363527-1|ABC88010.1| 1088|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 513
protein.
Length = 1088
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 161 PQSLLRVSCSTTINKTLCEHLCSVFIF*N 247
PQ+ RVSC I + +H+ VFIF N
Sbjct: 20 PQNRFRVSCQKVITHKMFDHVVLVFIFLN 48
>DQ363526-1|ABC88009.1| 1077|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 512
protein.
Length = 1077
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 161 PQSLLRVSCSTTINKTLCEHLCSVFIF*N 247
PQ+ RVSC I + +H+ VFIF N
Sbjct: 20 PQNRFRVSCQKVITHKMFDHVVLVFIFLN 48
>AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel,
voltage-dependent, T type, alphant regulator of
chromatin, sub protein.
Length = 2347
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 161 PQSLLRVSCSTTINKTLCEHLCSVFIF*N 247
PQ+ RVSC I + +H+ VFIF N
Sbjct: 1279 PQNRFRVSCQKVITHKMFDHVVLVFIFLN 1307
>AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated
calcium channel alpha13.2 subunit delta25B splice
variant protein.
Length = 1536
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 161 PQSLLRVSCSTTINKTLCEHLCSVFIF*N 247
PQ+ RVSC I + +H+ VFIF N
Sbjct: 462 PQNRFRVSCQKVITHKMFDHVVLVFIFLN 490
>AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated
calcium channel alpha 1H protein.
Length = 2353
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 161 PQSLLRVSCSTTINKTLCEHLCSVFIF*N 247
PQ+ RVSC I + +H+ VFIF N
Sbjct: 1279 PQNRFRVSCQKVITHKMFDHVVLVFIFLN 1307
>AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel alpha
1H subunit protein.
Length = 2353
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 161 PQSLLRVSCSTTINKTLCEHLCSVFIF*N 247
PQ+ RVSC I + +H+ VFIF N
Sbjct: 1279 PQNRFRVSCQKVITHKMFDHVVLVFIFLN 1307
>AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-type
calcium channel alpha-1H subunit protein.
Length = 2373
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 161 PQSLLRVSCSTTINKTLCEHLCSVFIF*N 247
PQ+ RVSC I + +H+ VFIF N
Sbjct: 1299 PQNRFRVSCQKVITHKMFDHVVLVFIFLN 1327
>AK000838-1|BAA91395.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ20831 fis, clone ADKA03080. ).
Length = 140
Score = 29.5 bits (63), Expect = 7.5
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +1
Query: 118 WNVESVENSKVQSWTPIITSC 180
W ++ ++N ++SWTP+++SC
Sbjct: 96 WQLD-IKNKNIRSWTPVLSSC 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,223,518
Number of Sequences: 237096
Number of extensions: 1090526
Number of successful extensions: 1640
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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